Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1746 ATGGGTAACTACAGGTTCAGATTATCAGATATGATCCCCAATGCCTGGTTTTACAAACTCAAGGACATGGGAAAAACAAGAAAGCAAACCCCAACAACTCATTCCAGGAAGAAAAAGCAACCTTCACCAGCCTCAACCCAAAAAGCATCAAAACCAAAGCAACCACACCAATACAATCTCAGAAAGTCTTACTATTTCACAAGGGAGCTTACCCCAAATGATAGAATCTACTCCTCACCAACACCAACAAATAACCAAAATGCCAAATACACCAATTCCCTTGAACCCCCCAGAAAATCATCCAAACAAAGACTCAAGAAAAGAACTTCAAGGACTTCTTCTCCTAAGCTTGTTGTTGTCTCTAACAATAACAACTCCTCATCACCAAATGATAGCTCCACTGAATCAGAGTACCCTGACCCAGAATTCAGAACAGACCGTGTTCTTCCAACTGAATCATTCGATGAAACGGTTCCTTGGGCCAACTCTTGTGCCTGCAGGGTACACTCCAACGCCAAGGACATCATCATTGATGTTGACAACAATTCCATAGCCAGAAAAGATGGTAAGCTAGAAGGGTATGAGTATGAATGTGATTCCTTCTCAGACCTTGTGCTTCCACCAATTGTGACCAAGCCTGCAATATTCAATGACTTGCTCAGTGATGTCAAGAAGAAAGAAACCAAACCAAGAAGCAAAATGGCTGCACATGAAGAGCCAAACCTGAATAAGGGGCCTCTGAGAGTTAAAATTGTGAAGGAAGACACTTCATCAATGAAGGAACATAAGAACACCTACGGAAGGAGATTCTCTGTGAGCTCTCCGGGAGTGAGGCTTAGAATGAACTCGCCGCGAATTGCGAGCCGGAGAATTCAGGCACATGGCCGGAGAAGCGTGTCCTCGGCCCCCCGGAGAAGCCTCTCGGATAGCTTTGCAGTTGTGAAGTCATCACTGAATCCACAGAGGGATTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGACATCAAAGGATTTGGAGGATCTTCTTGCTTGCTACCTTTCTTTGAATTCAGATGAGTATCACGATCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATAACTAG 1134 0.4321 MGNYRFRLSDMIPNAWFYKLKDMGKTRKQTPTTHSRKKKQPSPASTQKASKPKQPHQYNLRKSYYFTRELTPNDRIYSSPTPTNNQNAKYTNSLEPPRKSSKQRLKKRTSRTSSPKLVVVSNNNNSSSPNDSSTESEYPDPEFRTDRVLPTESFDETVPWANSCACRVHSNAKDIIIDVDNNSIARKDGKLEGYEYECDSFSDLVLPPIVTKPAIFNDLLSDVKKKETKPRSKMAAHEEPNLNKGPLRVKIVKEDTSSMKEHKNTYGRRFSVSSPGVRLRMNSPRIASRRIQAHGRRSVSSAPRRSLSDSFAVVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDNN* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1746 377 MobiDBLite consensus disorder prediction 72 98 - -
Gso18g1746 377 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Gso18g1746 377 Pfam Transcriptional repressor, ovate 317 373 IPR006458 -
Gso18g1746 377 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 377 - -
Gso18g1746 377 ProSiteProfiles OVATE domain profile. 313 372 IPR006458 -
Gso18g1746 377 MobiDBLite consensus disorder prediction 36 60 - -
Gso18g1746 377 MobiDBLite consensus disorder prediction 23 60 - -
Gso18g1746 377 MobiDBLite consensus disorder prediction 72 145 - -
Gso18g1746 377 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 311 374 IPR006458 -
Gso18g1746 377 MobiDBLite consensus disorder prediction 112 136 - -
Gso18g1746 377 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 377 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1746 Gso-Chr18 49847455 49849448 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso18g1746 Ovate 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1746 - - gmx:100794572 741.11