Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1744 ATGGAATTGCCTGATACAATCAGTACAGCCATGTACAAAGGGAGATTCTGCACTAGTGGTGGAGTTAAGTCTCAGCTTGGTTATGTTGAAACAGATCCATCTGGTCGATATGGTCGTTTCAGGGATGTTCTGGGGAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAGCAACTCCAGCGCCTTTATTCAGAGGTTCATCTCCTTAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAAAACCTTTAACTTTGTCACTGAATTGTTCACCTCCGGCACCCTTAGAGAGTATAGGCAGAAGTACAAGAGAGTTGATATCACAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTGATACATAGAGATCTCAAATGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGATTTAGGTCTGGCAGCTATACTTAAAAGCTCCCAACATGCACACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGGTAGATATATACTCCTTCGGTATGTGTATGATAGAGATGCTTACGTTTGAGTTCCCATACAGTGAGTGTGCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGAAAGATACCTGAAGCTTTTTACAGAATCGAAAATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTCTTAGCCATGGAACAACTTGAAATTCAATTGCCACCAAGCATACCAGCATTATTTACAAATAAATCTTTCAAGCTTAGTTGCCCTGCACCATTTCCCAGTGAGCATCGCGATCAAACAAAGAGCGCGGATATGACAATCACCGGGTCAATAAACGAAGAGGACAACACTGTTTTCCTTAAAGTTCGGATATCTGACATAATGGGGCACACAAGACATGTGTTCTTCCCATTCGACACATTAAAGGACACGGCTATTCAGGTGGCAATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTTGAGATTGGTGCAATGATAGATCATGAGGTATCAGCTCTAGTTCCAACTTGGAGGGACAGGGTGAAGTGTCACCACCAACGACAGTACAGCTTTAATTACGAAGAAGATGAAGATGTCAATAACCATCACCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGTGGTTCTGGCCACATGTCTGCTTCCAACTCCTTCAAGACCCATTTTCGTGGAAACCATTGCCCTTTTACTCAAGAATGGCCTCAAGATGATCCATTCATGAACGACGACGCAAGCTCTCAAGCCTCAATGAACTCCTTCAAGTGTTCGAGTTTCCAGTTCTGCGACCCGGGCCACGAAGATGAGCACGCCACCCCAACAGACGGACCCGAACGCAAAAAGTGCACACCATTATTATCGTACCGTATCGAAGAACCAGAACCCAATTTCACGAAACCGTTTAACTACTACCCTCCTCGTATGAACTCTTCGTGCGGCTGCAGCAGGTTCGGGTCGAGCCACGCGTGTCCGAGGCTTACGAGGATCCGGTCGTGCCCGCACGAGCGGAGGAGCCAGCAGCAGCGGTCGATGATGTTGGAGGAGATGTACAAGTATAAGAGACGCTTTTTCAACACCGTTGGCGCTGTTGAGAACATCGGTTTTCAGCATCCAGATCGCGTGTAG 1860 0.4575 MELPDTISTAMYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNKTFNFVTELFTSGTLREYRQKYKRVDITAVKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILKSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTFEFPYSECANPAQIYKKVTSGKIPEAFYRIENLEAQKFVGKCLANVSERPSAKELLLDPFLAMEQLEIQLPPSIPALFTNKSFKLSCPAPFPSEHRDQTKSADMTITGSINEEDNTVFLKVRISDIMGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPFEIGAMIDHEVSALVPTWRDRVKCHHQRQYSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTHFRGNHCPFTQEWPQDDPFMNDDASSQASMNSFKCSSFQFCDPGHEDEHATPTDGPERKKCTPLLSYRIEEPEPNFTKPFNYYPPRMNSSCGCSRFGSSHACPRLTRIRSCPHERRSQQQRSMMLEEMYKYKRRFFNTVGAVENIGFQHPDRV* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1744 619 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1744 619 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Gso18g1744 619 Gene3D Transferase(Phosphotransferase) domain 1 121 302 - -
Gso18g1744 619 SUPERFAMILY Protein kinase-like (PK-like) 40 342 IPR011009 -
Gso18g1744 619 PANTHER WNK KINASE 3 618 - -
Gso18g1744 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gso18g1744 619 CDD STKc_WNK 36 296 - -
Gso18g1744 619 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1744 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 618 - -
Gso18g1744 619 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1744 Gso-Chr18 49813682 49818937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1744 19 436 MAP Kinase Kinase Kinase AT3G51630 64.789 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso18g1744 Pkinase 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1744 K08867 - gmx:100272206 1283.86