Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1732 ATGGGGTGCTTCACTGTATTGAAGAGCAAAAAGAAAAAGTCCGATCCAATTACATACATAAAACATGTAAGCCATAATGAGAACGTACCTACAGTACTGCCTGAACCTCAAACTCGTACTCGCTCACTGCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGCCAGTAACAACAGAACGCGAACATTATCTGCTCCGTCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCTTCAATTGAGTATGAGGAACAAGAAGAGTCAAGACACCGAGCTGGATCAATGAAGGAGCAGCATTCATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTAGTGCATTGAAGGCTATTGGCAGCTTTAAGTCAGTGGCCTCAAGCAGTCCTCTCCATGCTTCTGGACCTTTGCCACTCCCACCTACTGGATCACTTCGGAATTTTCTGTATGAGGAAATTGCTGCTGCTTGCCACCATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCGTCCACCATATACAAGGCTTCCTTCGGTGACGACGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGGCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCACGAGAGGGTTCAGAACATAGAATGTTGGTTTATGAAAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACCTTCTTGCACGAAGAGGGGCCTTTTCAGGCTATGTATAATGAGTTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGCGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAAGAAGAGATTTCAAGCAGCTCATCTGCTGTTGGAAACCTATCAATGGAAACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTGGAGCTACTTACTGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCTTTCTTAGCCGATAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAAGGCCGCTTTCCTTCTAAAGCAGCAAGAACAATAGCTGATATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGACAGACCTACCATGAGGACTGTTGTTGAGCATCTCAAGATAATACAGGATTTGAAATATTCGTGCCGGTTCCCTCTGCAAGAACCAGCATCAAACTCTGGAAAACATATGTCAAGATCACCAAGTCTCAATGGCATCATCTGCCCTGCACCAAGGTTGAGTTTCTCACCATCACCACCATCAGGAGTTCCGGTATCTGTTTCGCCTCCAAGATGGTCTGGTGGAGGGCCCATTCTCCTCCCGCCGCCACGTGCTTGTGCTTCGAGCCTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1647 0.4523 MGCFTVLKSKKKKSDPITYIKHVSHNENVPTVLPEPQTRTRSLQSAPPSFRTRVKPIQPINKASNNRTRTLSAPSTLDAAEQDALASIEYEEQEESRHRAGSMKEQHSSSPQPLPLPSPQGGSALKAIGSFKSVASSSPLHASGPLPLPPTGSLRNFLYEEIAAACHHFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKIIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPAPRLSFSPSPPSGVPVSVSPPRWSGGGPILLPPPRACASSLSLEELDRQESRKSSSSASRRASVEGF* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1732 548 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Gso18g1732 548 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1732 548 MobiDBLite consensus disorder prediction 490 548 - -
Gso18g1732 548 PANTHER OS01G0588500 PROTEIN-RELATED 44 547 - -
Gso18g1732 548 MobiDBLite consensus disorder prediction 28 125 - -
Gso18g1732 548 PANTHER OS01G0822200 PROTEIN 44 547 - -
Gso18g1732 548 SUPERFAMILY Protein kinase-like (PK-like) 148 454 IPR011009 -
Gso18g1732 548 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Gso18g1732 548 MobiDBLite consensus disorder prediction 30 51 - -
Gso18g1732 548 MobiDBLite consensus disorder prediction 90 104 - -
Gso18g1732 548 MobiDBLite consensus disorder prediction 58 77 - -
Gso18g1732 548 Gene3D Phosphorylase Kinase; domain 1 149 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1732 Gso-Chr18 49699603 49704352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1732 148 448 Receptor kinase-like Gene Family AT4G02010 36.928 2.54e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Gso18g1732 PK_Tyr_Ser-Thr 4.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1732 - - gmx:100809117 1037.71