Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1725 ATGGCAAATCTTGGTTGTTCTAGTCGTAGGAAAGCAATTGAGGAGCTCCTTAGAGGGCGTGATTGTGCCAAACAACTTAGGAGTGTCATCAATGGGAGTTGTGAAGATGGATCATCAACAACCCCATCATTTGCTGAACAACTTGTGAAGGAGGTGCTCATGTCCTTCACCAACTCCCTCTCGTTCTTGAAGAACAACCCCACTTCTGAATCCCATGATGTTTCCAATGTTCAAGTTTGTGAATCTCCCAAGTCTGAGGACTCCCAAGAGAGCAATTGCAAGAGCTCCACCATTAAGGAACGTAGAGGGTGCTACAAGAGAAGAAGAACTGAACAAACATGGGAGAAGGAATCTGAAGCTCCAATTGATGACGGCCATCAGTGGAGAAAGTATGGCCAAAAGGAGATCCTGAATGCCAAATTCCCAAGGAACTACTATAGGTGCACTCACAAATTTGACCAAGGTTGCCAAGCAACAAAACAGGTGCAAAGAGTTCAAGAGGAACCAATCCTATACAAGACCACCTACTATGGCCTCCACACTTGCAAGAACTTGGCAAACCCTGAGATCATACTTGACCCTATGTCCCCTTCATCCTCATCCAAGTTCCTTAGCTTTGACAACTCCTTCCCAACCCCATCAAAGCAAGAGTGCCCCTTTCTCTCATCTTCTAATTTGCCATCATCAGTGAAAGGGGAGTGCAAGGAGGAGGTCCCTCCCTCAACTTCCTCCAATCATTATCTCATCTCTTCTGACCTCACTTTTGATAGCTCACCAAGGCATCATGTCACTCTATCATCAACACTTGACTCAGAGTACAAGAGTGTGGACATTTCGGATGTCTTGTATGATTCTGCTCAGCTTGATGATGCCTTTGAACCCTTCCTTGAATTTAGATGA 900 0.4522 MANLGCSSRRKAIEELLRGRDCAKQLRSVINGSCEDGSSTTPSFAEQLVKEVLMSFTNSLSFLKNNPTSESHDVSNVQVCESPKSEDSQESNCKSSTIKERRGCYKRRRTEQTWEKESEAPIDDGHQWRKYGQKEILNAKFPRNYYRCTHKFDQGCQATKQVQRVQEEPILYKTTYYGLHTCKNLANPEIILDPMSPSSSSKFLSFDNSFPTPSKQECPFLSSSNLPSSVKGECKEEVPPSTSSNHYLISSDLTFDSSPRHHVTLSSTLDSEYKSVDISDVLYDSAQLDDAFEPFLEFR* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1725 299 Gene3D WRKY domain 92 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1725 299 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1725 299 MobiDBLite consensus disorder prediction 67 92 - -
Gso18g1725 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 290 IPR044810 GO:0003700
Gso18g1725 299 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 290 - -
Gso18g1725 299 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1725 299 MobiDBLite consensus disorder prediction 67 94 - -
Gso18g1725 299 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1725 299 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1725 Gso-Chr18 49621510 49623522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1725 7 208 WRKY Transcription Factor Family AT3G56400 38.739 9.39e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g1725 WRKY 8.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1725 - - gmx:100170682 592.038