Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1701 ATGGCTTCTACTTCTAGGGAGAAAAAAATAGAGTCTCTGGAAGACACGTTGCAACAACTTCGCGATGTCACAAACTCCAGTGCTTTGAACAAAGCCTCAATTATTGTAGACGCCTCAAAATACATAGAGAAGTTGAAACAAAAAGTGGAGGGACTGAACTCAGAGCTGGGAATCGCGGATTCATCAACCTCTCAAATTGATGAACTGCCTATGGTAGTTGTGAAAACCCTAAAAAAGGGTTTCCTGATTAATGTGCTTTTAGAAAAGAATTTCCCTGGAATGCTCGTCTCTATACTCGAAACCTTCGAAGAACTGGGCCTTGATGTCCTTGATGCTAGGGTTTCTTGTGAAGACAGTTTCCAGCTAGAAGCTGTAGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGCTGCAAGCAATAAAGAACGTGGACTAA 459 0.427 MASTSREKKIESLEDTLQQLRDVTNSSALNKASIIVDASKYIEKLKQKVEGLNSELGIADSSTSQIDELPMVVVKTLKKGFLINVLLEKNFPGMLVSILETFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLQAIKNVD* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1701 152 Gene3D - 5 60 IPR036638 GO:0046983
Gso18g1701 152 Coils Coil 3 23 - -
Gso18g1701 152 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Gso18g1701 152 ProSiteProfiles ACT domain profile. 83 152 IPR002912 -
Gso18g1701 152 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 152 - -
Gso18g1701 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 58 IPR036638 GO:0046983
Gso18g1701 152 CDD ACT_UUR-ACR-like 92 148 - -
Gso18g1701 152 Coils Coil 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1701 Gso-Chr18 49322911 49324585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1701 - - gmx:100782382 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1701 18 49322911 49324585 Gso9g2296 9 47210984 47212947 GST