Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso18g1698 | ATGGCAGATCCTGCTAGTTATGGGAGTCTTGAGCGTGATATTGAACAAGCACTCATTGCCATAAAAAAAGGGACTCAGTTAATAAAATACAGTCGAAAAACCAAGCCAAAAGTTTGCCCATTCAGACTTTCTCTGGATGAAACAACACTAATTTGGATTTCTCACAAGAAGGAAAGGAATTTGAAATTATCTTCAGTTTCACGTATTATCCCTGGACAAAGAACTGTTGTCTTTCGAAGATATTTACAGCCAGAAAAAGATTATCTATCATTTTCACTTGTTTATAATAACGGGGAGCGAACACTTGATTTGATATGCAAGGACCAAGATGAGGCAGAGGTATGGTTTACAGGCCTTAAGACATTAATTTCTACTGGAAAGCTTAGGCGCATTGGAAGTGAATTATTTAATGATGGTGCTGATTTTATTCCAAACGGTGGTCCTTTTGGTGCAGCACTAGAATTTGCTATAAGCATTTCTCATAACAAGAAGGTCTCTTTTGATTTTGCTTCTCGTGAGCCTTCATTGAATTTGGCAACCACAGATGTGGGGTTAGAGCGACGTGCTAATAACATGCAACCAAGAACAAGCATTGGAGATGGTTTTCGTGTCAGCGTGTCGAGTACACCGAGTGTTTTGAGTACAGGGTCAGGACCAGATGACATAGAATCACTTGGTGATGTTTATATATGGGGAGAGGTTTGGGCAAGTGGGGTTTCACCTGATGGATTTTCCACACAAGCCCCTTCCACAACAGATGTGTTGATTCCTAAGCCATTGGAGTCAAGTGTTGTTCTTGATGTTCAACAGATTGCATCTGGTGTGAGGCACATTGCTTTGGTAACAAGGCAAGGGGAGGTTTTTACTTGGGGAGAAGAATGTGGGGGAAGACTTGGCCATGGAATTGATAGAGATTTCGGTCGCCCTCAACTTGTTGAGTTTTTGGCAGTTACTAGTATGGATTTTGTTGCATGTGGAGAGAATCATACATGTGCTGTTTCTACATATGATGATATTTTCTCATGGGGTGATGGTACATACAATGTTGGACTTCTTGGTCATGGAACTGATGTTAGCCATTGGATACCAAAAAGAATTAGTACCGGTCCTTTAGAAGGGCTTCAAGTTATATCCATTGCATGTGGCACATGGCATTCAGCACTAGCAACTTCTAATGGAAAACTTTTTACCTTTGGTGATGGAACATTTGGAGTTTTAGGCCATGGAAACAGAGAAAGTATTCCATATCCAAAGGAGGTGAAATTTTTAAATGGATCGAAAACCATTAAGGTTGCATGTGGAGTGTGGCACACGGCAGCTATTGTAGAGGTTACTTTTCAATCCAATTCAAACGTTTCATCCAGGAAGCTTTTCACTTGGGGAGATGGCGACAAATATCGTTTAGGACATGGGAACAAGGGAACATACCTTCAACCAACTTGTGTCTCTGCACTTATTAAATATAATTTCCACCAGATAGCATGTGGACACACCATGACTGTTGCCCTCACTACATCTGGTCACGTCTTTACTATGGGAAGCAATGAAAATGGTCAACTAGGAAACCGTTTGGCTGATGAAAAAGTACCTATCCTAGTGCAAGACAAGTTGGTGGGTGAATTTGTTGAGGAAATAGCATGTGGTTCTCATCATGTTGCTGCCTTGACATCAAGAAGTGAACTATATACATGGGGGAAAGGTGCCAATGGGAGATTGGGACATGGAGACATAGAGGATAGAAAATCCCCAACATTAGTAGAATCCTTAAGAGATAGGCATGTAAAGAATATCTCTTGTGGCTCAAACTTTACATCTTGCATATGCATTCATAAATGGGTCTCTGGAGTTGACCAATCTGTTTGCACTGGTTGTAGACAACCATTTGGTTTCACTAGAAAGAGGCATAATTGCTACAATTGTGGATTAGTGCATTGCCATGGTTGTAGTTCAAAAAAGGTTTTGAAAGCATCATTGGCTCCAACACCGGGAAAACCTCATCGCGTGTGTGACTCTTGTTATAATAAGCTTAAAGCTGTTGAGGCATGTGCTAGTTCTAATCTTCATAGGAAAATGACCACAACACCTCGCTATTCCATAGATGGTAGGGAAAGATTTGGTCAAGGAGAAGTAAAGTCTTCAAGACTTATTTTGCCTCCTATCACAGAACCAATGAAATTTCATCAGATAATGGCTAATAAGATGGGAAACAAACATGATTATTCTTCCATGTCTCCAACTTCCCAAGTTCCATCACTTTTGCAATTGAATGATATTGCATTTGGTAACTCAATAAGTTCAACTCAAAATGTTTTGAAGTCTGCTATAGCTCCTAGTCCAACACCAACTCCACCTGTCAACCAAAGACCAGCATCTCCTTATTCAAGAAGGGCAAGCCCTCCACGTTCTAGAGCTTCAGGATTTTCTAGAAGTCTTGTTGATAGTTTGAGGAAGACAAATGAACTTTTGAATCAAGAAGTTTCAAAAATGCAAAATCAGATTCGAAGTTCGAAGCTAAGAAATGACATGGAAATTCAAAAGCTCCAAAAAACTATCACCGAAGCTACCTCCTTTGCTGTAGAGGAATCCTCTAAGCATAAAGCCATGAAAGAATTTTTTGAGTCTACGGTGGATCAGATGAAGGAAATGATTGAGAAGTTGCCTCCAGATGTTTTAGATAGTGAAAATTGGAAAATCATGCTTACTCGAGCTGAGGATTTTCTAAAAGAAAAATCAGAATTTGAAACACCATCAAATGTGAAGTCTCAACAACAACATGAACTTAATACACCTAACTCATATAGTAGCTCTTCTAAATTGCAAGAACATGGAATAGAAGAAAATAATGAAACGGTAGGAGTTGACCCATCATCACAAGATGAAGGAAACGTTCAAGTAAGCAATAGCTCATCTTTATCAAACAATGAAGCATCAATGCCTTCACAAAATGATTCAAAATCACAACACTCTTCAAGGCCTGGCAAAGAAGGAGAAATGCAGGTCATGGAACAATTTGAACCTGGGGTACATGTGACACTAATAGTAAAGCCTGGTGGTGTCAGAATTTTCAAACGAGTCAAATTCAGTAAACGAAGGTTCCATGAACATCAAGCAGAAGAATGGTGGAGCAAAAATAAAGATAGAGTGCTTAGGAAATATAGTACTCCTCAAGCTACAAATTTTGAAGGTATTAGGTCATCTAACACTCTACCACCACCACCTACAGAAGAAAATATTGAGACAATGTCTTCCTAA | 3252 | 0.3951 | MADPASYGSLERDIEQALIAIKKGTQLIKYSRKTKPKVCPFRLSLDETTLIWISHKKERNLKLSSVSRIIPGQRTVVFRRYLQPEKDYLSFSLVYNNGERTLDLICKDQDEAEVWFTGLKTLISTGKLRRIGSELFNDGADFIPNGGPFGAALEFAISISHNKKVSFDFASREPSLNLATTDVGLERRANNMQPRTSIGDGFRVSVSSTPSVLSTGSGPDDIESLGDVYIWGEVWASGVSPDGFSTQAPSTTDVLIPKPLESSVVLDVQQIASGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFGRPQLVEFLAVTSMDFVACGENHTCAVSTYDDIFSWGDGTYNVGLLGHGTDVSHWIPKRISTGPLEGLQVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESIPYPKEVKFLNGSKTIKVACGVWHTAAIVEVTFQSNSNVSSRKLFTWGDGDKYRLGHGNKGTYLQPTCVSALIKYNFHQIACGHTMTVALTTSGHVFTMGSNENGQLGNRLADEKVPILVQDKLVGEFVEEIACGSHHVAALTSRSELYTWGKGANGRLGHGDIEDRKSPTLVESLRDRHVKNISCGSNFTSCICIHKWVSGVDQSVCTGCRQPFGFTRKRHNCYNCGLVHCHGCSSKKVLKASLAPTPGKPHRVCDSCYNKLKAVEACASSNLHRKMTTTPRYSIDGRERFGQGEVKSSRLILPPITEPMKFHQIMANKMGNKHDYSSMSPTSQVPSLLQLNDIAFGNSISSTQNVLKSAIAPSPTPTPPVNQRPASPYSRRASPPRSRASGFSRSLVDSLRKTNELLNQEVSKMQNQIRSSKLRNDMEIQKLQKTITEATSFAVEESSKHKAMKEFFESTVDQMKEMIEKLPPDVLDSENWKIMLTRAEDFLKEKSEFETPSNVKSQQQHELNTPNSYSSSSKLQEHGIEENNETVGVDPSSQDEGNVQVSNSSSLSNNEASMPSQNDSKSQHSSRPGKEGEMQVMEQFEPGVHVTLIVKPGGVRIFKRVKFSKRRFHEHQAEEWWSKNKDRVLRKYSTPQATNFEGIRSSNTLPPPPTEENIETMSS* | 1084 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 285 | 333 | IPR000408 | - | |
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 392 | 441 | IPR000408 | - | |
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 457 | 503 | IPR000408 | - | |
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 560 | 607 | IPR000408 | - | |
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 506 | 555 | IPR000408 | - | |
| Gso18g1698 | 1083 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 338 | 388 | IPR000408 | - | |
| Gso18g1698 | 1083 | MobiDBLite | consensus disorder prediction | 1054 | 1083 | - | - | |
| Gso18g1698 | 1083 | ProSiteProfiles | PH domain profile. | 91 | 124 | IPR001849 | - | |
| Gso18g1698 | 1083 | PANTHER | CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN | 13 | 1060 | - | - | |
| Gso18g1698 | 1083 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 431 | 441 | IPR000408 | - |
Showing 1 to 10 of 45 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso18g1698 | - | - | gmx:100779684 | 2127.44 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso18g1698 | 18 | 49232839 | 49240289 | Gso9g2298 | 9 | 47238923 | 47244605 | GST |
Showing 1 to 1 of 1 entries