Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1667 ATGAAGACTAATAACAACGTTTCTGGGGAGAGGAAATCGCGGAAGAGACGCAACGGTGGAAGTGATTATGTGGAAGACACACTTGAAAAATGGAAGGAGTACAACAGGCAGCAACAACTTGGCTCTAGAGAAAATGGGGTGGAAGTGATTCACAAAGCTCCCGCAAAAGGGTCGAGAAAAGGGTGCATGAGAGGAAAGGGAGGGCCTCAGAACTCCGATTGCAAGTTCAGAGGTGTGAGGCAGAGGATTTGGGGTAAATGGGTTGCTGAGATTCGCGAACCTATCAATGGCAAGCTTGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCTCCACTGCACTTGAGGCTGCTCTTGCTTATGATGAAGCGGCTAAGGCCTTGTATGGCCCTTGTGCCCGTTTGAATTTTTCCGAGTCAATAGACTCTAATGGATCATCATCTTCTAGTGGAAGTGATAAAAAATCACCAAGTGGTTTTTCAGAGAATGGTTGTGATGTTGCAAAAGCTGAGGAATTGGAGGTGAACCGTCATCGGTGTCATGAAGAGAAACCAAGATTTTCTAAGGTTGGTGTCTTTGAGGAGACAGAAGAGAAACCGATTCTTTCTGGAGGTTGTGTGGCTGATGACTCAATAGAGGAGTTGAAGGAAATCACAACTGGCTTTGAACAGTGTCAAACAAGTGAAGAATGTATGGCAACAACTTTGAAAAATGTTAAGTCTGAAGTACCAGGAGAAAGTGAAGAAATGGAGAGAGAATTGGAGGAGGTTGTGAAAAACTCTGGCATAGGTGGAGAGGTTAATCACTTGCGGAAGGAGCCTATGGATATAGCCATGAATGCAAGAGGTAACTATTGTAGCTCTCCTGGCTCTTCTGATGCTGCTACTGAACATGAGATTTTGCTCAAGAGTGAAGAAACAAGAGGAGAATCAGTTGAAACTTTGAACTCTTGTGAGTTGAGCTGCAGCAACCATTGCCTTGGATTTATGCATAATAATATGCTGCCAGATACCAATCTAAGACCAAATCCTGAGGCATCTATTGCAAAGAAACATACTGAGGAAGTAATTTCTGAAATCCTAGGACTATGTCAAGGCAAGTGCTTGAAGATTAGCCATGGTCAGTCACCAAATGAGCAATTTAGAAGAAGTGAACATTTTGATGAGATGAAAACTAGGCTTAAGGGTTTGGAATGCAAGCTGAGAGCACATTCTATTCATTACAAGAATCAAGCACCAATAGTAGGGGACTCCAATCATCCTTCTATGCAGGGAATTCATCTGTTTGGTGGTGGCACTGTTGGACCAATTGAAAGTATGTCCCAAGTTGAGGCTTTGAACAACATCAACACAAACAGAAATTCACTACCTGGATTTAGTTCTGGCCATGGTAGGAAGTTGTGTGATCTTTCTCAACAGCTGCACAAACTTGGTGGATACCTTCCTGAGCATTGGAATAGTGTGCAGTTTCCAGACTTGGAAGTTGGTCATGATTATAGTTTCTTAAATCCTGATTATGATTTTGGTTTATATGAAGAGCAGAAGTTACTTGATATATGCTTTCCACATGTAGGATCTTAG 1584 0.4242 MKTNNNVSGERKSRKRRNGGSDYVEDTLEKWKEYNRQQQLGSRENGVEVIHKAPAKGSRKGCMRGKGGPQNSDCKFRGVRQRIWGKWVAEIREPINGKLVGEKANRLWLGTFSTALEAALAYDEAAKALYGPCARLNFSESIDSNGSSSSSGSDKKSPSGFSENGCDVAKAEELEVNRHRCHEEKPRFSKVGVFEETEEKPILSGGCVADDSIEELKEITTGFEQCQTSEECMATTLKNVKSEVPGESEEMERELEEVVKNSGIGGEVNHLRKEPMDIAMNARGNYCSSPGSSDAATEHEILLKSEETRGESVETLNSCELSCSNHCLGFMHNNMLPDTNLRPNPEASIAKKHTEEVISEILGLCQGKCLKISHGQSPNEQFRRSEHFDEMKTRLKGLECKLRAHSIHYKNQAPIVGDSNHPSMQGIHLFGGGTVGPIESMSQVEALNNINTNRNSLPGFSSGHGRKLCDLSQQLHKLGGYLPEHWNSVQFPDLEVGHDYSFLNPDYDFGLYEEQKLLDICFPHVGS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1667 527 Pfam AP2 domain 74 131 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 408 - -
Gso18g1667 527 MobiDBLite consensus disorder prediction 143 164 - -
Gso18g1667 527 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Gso18g1667 527 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g1667 527 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 408 - -
Gso18g1667 527 ProSiteProfiles AP2/ERF domain profile. 75 139 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 SUPERFAMILY DNA-binding domain 75 141 IPR016177 GO:0003677
Gso18g1667 527 CDD AP2 74 138 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 SMART rav1_2 75 145 IPR001471 GO:0003700|GO:0006355
Gso18g1667 527 MobiDBLite consensus disorder prediction 143 160 - -
Gso18g1667 527 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1667 Gso-Chr18 48667775 48670108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1667 14 163 AP2-EREBP Transcription Factor Family AT2G40340 52.632 5.03e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso18g1667 AP2 9.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1667 - - gmx:100500303 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1667 18 48667775 48670108 Gso7g1328 7 19303521 19305815 GST