Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1666 ATGACCGTTAGTCTGTTCATCTTTCTTCTCCTCTTCTTCTTTTTCCATCCCGCCGTTTCTCTCTCCTCCGACGGCATCGCGCTTCTCACTCTCAAGTCTGCCGTGGATGCCTCCGGCGCCTCCGCGTTCTCCGACTGGAACGACGCCGACGCCACGCCGTGCCAGTGGTCCGGCGTCACGTGCGCGGACATCTCCGGCCTCCCCGAGCCGCGAGTCGTCGGAGTCGCGCTCTCCGGCAAGGGCCTCCGCGGCTACCTCCCGTCGGAGCTCGGCACGCTCCTCTACCTCCGCCGCCTCAACCTCCACACCAACGCCCTCCGCGGCGCCATCCCGGCGCAGCTCTTCAACGCCACCGCGCTCCACAGCGTCTTCCTCCACGGTAACAATCTCTCCGGCAACCTCCCTCCCTCCGTCTGCACCCTCCCCCGCCTCGAAAACCTCGACCTCTCCGACAACGCCCTCTCCGGCGCCATTCCCGACACGCTCCGAAAATGCTCCAACCTCCAGCGCTTGATCCTCGCCCGGAACAAATTCTCCGGCGATATTCCGGCGAGTCCGTGGCCGGAGATGGAAAACCTAGTTCAGCTCGACCTTTCATCGAACCTTCTAGAAGGTTCGATCCCGGACAAGCTCGGTGAGCTTAAAATCCTAACCGGAACCCTAAACCTCTCATTCAACCACTTGTCTGGTAAAATCCCTAAATCTCTCGGAAACTTGCCTGTTGTCGTGAGCTTCGATCTTCGAAACAATTATTTGAGCGGTGAGATTCCCCAAACGGGGTCGTTTTCGAACCAGGGCCCCACTGCGTTCCTCAACAACCCGAACCTGTGCGGATTTCCTTTGCAGAAGCCCTGCGCAGGTTCGGCGCGGAGCGAACCGGGGCTCAGCCCTGGTTCTCGTGGGGCGCACCGGCCCACAAAGGGGCTGAGCCCCGGTTCGATTATCTTGATCTCGGTGGCGGATGCCGCCGGGGTGGCCTTGATTGGACTTGTGGTGGTTTATGTTTATTGGAAGAGGAAGGGCAAGTCCAATGGGTGTAGTTGCACTTTGAAGAGGAAGTTTGGTGGGGAGAGTGAGGAGTTGAGTTTGTGTTGTTGGTGTAATGGGGTGAAGAGTGATGACTCTGAGGTGGAGGAGGGGGAGAAGGGAGAGGGGGAGAGTGGGAGAGGGGAAGGGGATTTGGTGGCCATTGACAAAGGTTTCAACTTTGAGCTTGATGAGTTGTTGAGGGCTTCTGCTTATGTGTTGGGGAAGAGTGGATTGGGGATTGTGTATAAGGTGGTGCTTGGGAATGGGGTGCCTGTTGCTGTGAGGAGATTGGGGGAGGGTGGAGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCCATTGGGAAAGTGAAGCATCCCAACATTGTGAGGTTAAGAGCATATTATTGGGCTCCTGATGAGAAGCTCTTGATCAGTGATTTCATCTCCAATGGCAATTTGGCCACTGCCCTTAGAGGGAGAAATGGTCAACCATCTCCAAATCTTTCATGGTCAACCAGGCTAAAAATCATCAAAAGAACAGCCAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACGTCAAACCCTCCAACATCCTCCTCAGCACGGACTTCCAACCCCACATTTCTGATTTTGGTCTTAGCAGACTGATCAGCATCACTGGCAACAACCCCTCCTCTGGTGGCCTTATGGGAGGAGCTTTTCCTTACTTGAAGCCATCGCAAACAGAGCGAACTAACAACTACAAAGCCCCCGAGGCTCGAGTCCTGGGTTGCATACCCACTCAGAAGTGGGATGTGTATTCATTTGGAGTTGTATTACTTGAATTGCTTACTGGCAAGGCCCCGGATTCTTCTCCAGCCGCATCAACTTCCATGGATGTCCCTGACTTGGTGAGATGGGTTAGGAAAGGGTTTGAACAAGAAAGTCCATTATCTGAAATTGTTGATCCGTCGATGCTCCATGAAGTGCATGCCAAGAAAGAGGTACTGGCTGTGTTTCATGTAGCACTACAATGCACTGAGGGAGACCCTGAAGTCAGGCCTAGAATGAAAACTGTCTCCGAAAATCTTGAAAGGATTGGATAA 2121 0.5408 MTVSLFIFLLLFFFFHPAVSLSSDGIALLTLKSAVDASGASAFSDWNDADATPCQWSGVTCADISGLPEPRVVGVALSGKGLRGYLPSELGTLLYLRRLNLHTNALRGAIPAQLFNATALHSVFLHGNNLSGNLPPSVCTLPRLENLDLSDNALSGAIPDTLRKCSNLQRLILARNKFSGDIPASPWPEMENLVQLDLSSNLLEGSIPDKLGELKILTGTLNLSFNHLSGKIPKSLGNLPVVVSFDLRNNYLSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCAGSARSEPGLSPGSRGAHRPTKGLSPGSIILISVADAAGVALIGLVVVYVYWKRKGKSNGCSCTLKRKFGGESEELSLCCWCNGVKSDDSEVEEGEKGEGESGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVRLRAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLKIIKRTARGLAYLHECSPRKFVHGDVKPSNILLSTDFQPHISDFGLSRLISITGNNPSSGGLMGGAFPYLKPSQTERTNNYKAPEARVLGCIPTQKWDVYSFGVVLLELLTGKAPDSSPAASTSMDVPDLVRWVRKGFEQESPLSEIVDPSMLHEVHAKKEVLAVFHVALQCTEGDPEVRPRMKTVSENLERIG* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1666 706 ProSiteProfiles Protein kinase domain profile. 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1666 706 SMART serkin_6 414 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1666 706 SMART LRR_typ_2 93 117 IPR003591 -
Gso18g1666 706 SMART LRR_typ_2 190 214 IPR003591 -
Gso18g1666 706 SMART LRR_typ_2 141 164 IPR003591 -
Gso18g1666 706 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Gso18g1666 706 CDD STKc_IRAK 416 705 - -
Gso18g1666 706 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 706 - -
Gso18g1666 706 Gene3D Phosphorylase Kinase; domain 1 398 485 - -
Gso18g1666 706 SUPERFAMILY Protein kinase-like (PK-like) 415 702 IPR011009 -
Gso18g1666 706 Pfam Protein kinase domain 415 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1666 706 Gene3D Transferase(Phosphotransferase) domain 1 486 706 - -
Gso18g1666 706 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Gso18g1666 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Gso18g1666 706 Gene3D Ribonuclease Inhibitor 21 186 IPR032675 -
Gso18g1666 706 Gene3D Ribonuclease Inhibitor 187 287 IPR032675 -
Gso18g1666 706 SUPERFAMILY L domain-like 23 282 - -
Gso18g1666 706 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 5 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1666 Gso-Chr18 48651254 48656381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1666 17 705 Receptor kinase-like Gene Family AT1G67510 68.608 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso18g1666 Pkinase 7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1666 - - gmx:100787710 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1666 18 48651254 48656381 Gso7g1326 7 19286658 19291744 GST
Gso18g1666 18 48651254 48656381 Gso1g1064 1 43701061 43706800 PCT