Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1665 ATGAAGCAAGTTGTAGGAATGGTGGTTTCCAATAAGATGCAGAAATCAGTTGTGGTGGCAGTGGATAGACTTTTCTACCACAAATTGTATGATCGTTATGTCAAGCGCACCTCTAAATTCATGGCTCACGATGAGAACAACCTCTGTAACATTGGTGACAAAGTTCGACTGGATCCTTCTAGGCCTTTGAGCAAGCATAAACACTGGGTTGTTGCTGAAATTCTTAAGAAGGCACAGATATACGTTCCACTGTCCACGCCAGCATCTGATAATGTGAACTCCAGCTCTGTAGCACCAGCTTCATAA 306 0.4314 MKQVVGMVVSNKMQKSVVVAVDRLFYHKLYDRYVKRTSKFMAHDENNLCNIGDKVRLDPSRPLSKHKHWVVAEILKKAQIYVPLSTPASDNVNSSSVAPAS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1665 101 SUPERFAMILY Nucleic acid-binding proteins 2 85 IPR012340 -
Gso18g1665 101 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 TIGRFAM uS17_bact: ribosomal protein uS17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 PANTHER 37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL 1 93 - -
Gso18g1665 101 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 93 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gso18g1665 101 Gene3D - 1 97 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1665 Gso-Chr18 48644408 48647801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1665 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 36.620 6.42e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1665 K02961 - gmx:100305504 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1665 18 48644408 48647801 Gso7g1325 7 19280587 19282645 GST