Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1655 ATGATGCAATCAGAGGATCTGCAATTCCAATGGCCATTCTTTGAAGACATGAACTCAACTTTTGATCAAGGTGTTGAGTCCTATGGCTTCACCACCATGTATGGCCACGTTGGTGATTGTGGACCTTATGACTTCACTATGAATGACCATGTTGGTGATTGTGGATTCAATACTCTATTGAGCACACCAGAGGATTCTACTTCTGAAATTTGTTCCATCCCCTTTCCTTCCTCCCCCATTTTCTCCATTGATCATATTCATATACAATACCCAATCAATGAAGAAACCATGCACCTTCCATCACTCATGGAATTGGATGATTTTGATTCCATCTTGGATACTCAAATTATTAGTATTCAAGGTCATGGAGAAAGTGAAGGGAGCTTCTTCCCTTCACAGAATTTGTCGAGTGAGGTGGAAAATGCATGGAGTCCAACCCCATCTGTGAGGTCAGAGTTGTCCACAAATCAAACATCACCATTGACTTTACCACTAGAAAACATGGAAGTCGAAAACCAAGTGAGTCTTCCACACTTGTTGAAGGCCTATGGAGAAGCCTTGGAGCAAGGACAAAAAGCACTAGAAGAAGTGATTTTGAGGTGCATAAGCCAGAAAGCTAGCCCACTTGGTGAGTCTCTAGAGCGCCTTGCATTCTACTTGTCTCAAGGCATGACAAATCATGGAGACTATCTAAAAGGGGAGGCCTTAAAGAACTTTGAGGCTGCTTTGAGGGCATTATATCAAGGATTCCCAATTGGGAAAATTGCTCACTTTGCAGCTGTTTCAGCAATTCTCGAAGCCTTGCCACAAGATTGTGATGTGCACATAGTGGACTTTTATATTGGACATGGTGTTCAATGGCCTCCAATGATTGAGGCTATTGCACACATGAACAAAACATTGACATTGACATCAATCAAATGGGGTGGTGAGGTTCCTGAATGTGTTTCTAGTCCATGCAATTTTGAGGAAACTAGAAGGCAGCTCTATGAGCATGCCAAATCCTGTGGGTTGAAGTTGAAGGTTGAGGAGAAAGGAGTGGAGGAATTGGTTAGTGAGATTAAGAAAATGAACAAAAAGGGTGAGAAGGGAGAGTTTTTGGCCTTCAATTGCATGATTGATCTTCCTCATATGGGAAAAGTAAGGAGCAGAAAACATGTCTTACAGTTTCTAAGGGTAGCTGATGAATTGATAAGCACCTCTGACAACAGCGGAATTATCACTTTTGGGGATGGGGATGCTTTTGAGAAAGTGAAAAATAACTTGAATTTCAGGTCATTTTTTGATGGGCACTTAGTGCATTACCAAGCCTTGTTAGAATCAATGGAATCACATTTCCCAACCAGTTTCTCAGAAGCAAGAATTGCCATGGAGAAATTATTTTTGCAACCTTGCATCTCTTCTCTTGATTGGTTACAAACATGGGAGGAGATGAAAAGGGGAGGCCATCTTGAGGAAGAAACTAGCTTAGAGGGTTGCCAATTGAGCAAAAATATCTTAATGGAAATTAGAGAAGTGTTGAGAGGAAGTGATGGTTCCTATCAGGCCAGGATTGAAGGCCAACATGACAATGAACTAGTTTTGGAGTACAAAGGAACTCAACTATTAAGATTTTCAACTTGGAAAAACTAA 1632 0.4112 MMQSEDLQFQWPFFEDMNSTFDQGVESYGFTTMYGHVGDCGPYDFTMNDHVGDCGFNTLLSTPEDSTSEICSIPFPSSPIFSIDHIHIQYPINEETMHLPSLMELDDFDSILDTQIISIQGHGESEGSFFPSQNLSSEVENAWSPTPSVRSELSTNQTSPLTLPLENMEVENQVSLPHLLKAYGEALEQGQKALEEVILRCISQKASPLGESLERLAFYLSQGMTNHGDYLKGEALKNFEAALRALYQGFPIGKIAHFAAVSAILEALPQDCDVHIVDFYIGHGVQWPPMIEAIAHMNKTLTLTSIKWGGEVPECVSSPCNFEETRRQLYEHAKSCGLKLKVEEKGVEELVSEIKKMNKKGEKGEFLAFNCMIDLPHMGKVRSRKHVLQFLRVADELISTSDNSGIITFGDGDAFEKVKNNLNFRSFFDGHLVHYQALLESMESHFPTSFSEARIAMEKLFLQPCISSLDWLQTWEEMKRGGHLEEETSLEGCQLSKNILMEIREVLRGSDGSYQARIEGQHDNELVLEYKGTQLLRFSTWKN* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1655 543 Pfam GRAS domain family 178 542 IPR005202 -
Gso18g1655 543 Coils Coil 340 360 - -
Gso18g1655 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 39 542 - -
Gso18g1655 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 542 IPR005202 -
Gso18g1655 543 ProSiteProfiles GRAS family profile. 167 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1655 Gso-Chr18 48502215 48504065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1655 177 542 GRAS Transcription Factor Family AT5G66770 25.389 8.91e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso18g1655 GRAS 5.5e-38 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1655 - - gmx:100784347 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1655 18 48502215 48504065 Gso7g1313 7 19073742 19075655 GST