Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1653 ATGAGGATGGAAGAAGAGAGACATGGCTCATCGGAATGTTCAAAGACAAGCCCTTCTAACGAAGAAGATTGTGAAGAAAGTGAGGGCTATGAAGATGAAAGCAAGCAAAACAACAATAATGGAGGAAGCTCAAGCAACAGCACTGTGGAAGAGAACGAGAAGAAGACAACAGTGAGGCCCTATGTTAGATCCAAGATGCCAAGGCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTAGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGCCATCTACAGATGTACAGGAGCAAGAAGGTAGACACAAATCAAGAAACTGGAGACAGAAATGTTTACAATCTTAGCCAACTTCCCATGCTTCAAGGCTATAATCCAAGCCAAAGTTCATCATACAGATATGGATATGGGGATGCTTCTCTCGCTATCTATGAAAACATGGTGCACAGGCCTTTCATGAATAGAAGTTCATTAGATGAATCTGGAGCTGAATTTTGTGGCAGCAGATTAACTGAGAGAATCCATGGGACCAATAGTAACATCAATTGGACTCGTAACATGTTCCAAGCTGATTCTTCTTCTAGTTTCAATGAACCATCAACAAGCAAAGTCCAAGAACCAAAACATAAGTTCTTCTCATTTGGTGGTAATGAATCCTCATGCACACAAATCAAAATGAGCCAGGTTGATCTACATCAATCAACTCAGCTGCAACCAGGTGCACAAGAGCTCATGCCTAATAATAAGTTTGCAACAAATGAGGTGGAACTGAAGACCTTGAAAAGAAAGGCTTCAGATATTGACCTTGATTTGAATCTGTCACTTAAGTTAAATTCAAGGGTCAATGCTGAGAACCAAGGAAGCATGGTGGACCATGAAGTTGTTGATAGCAATCTATCACTTTCTTTGTGTTCACAATCCTCCTCCTTTAGCAGCAACAGGTTGAAAAACTCACAAGATCACTCTAAGGAGCAAGGGGAAATTATTAGAGCCAGTGCTCTGGATCTAACTATATGA 1083 0.4081 MRMEEERHGSSECSKTSPSNEEDCEESEGYEDESKQNNNNGGSSSNSTVEENEKKTTVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDTNQETGDRNVYNLSQLPMLQGYNPSQSSSYRYGYGDASLAIYENMVHRPFMNRSSLDESGAEFCGSRLTERIHGTNSNINWTRNMFQADSSSSFNEPSTSKVQEPKHKFFSFGGNESSCTQIKMSQVDLHQSTQLQPGAQELMPNNKFATNEVELKTLKRKASDIDLDLNLSLKLNSRVNAENQGSMVDHEVVDSNLSLSLCSQSSSFSSNRLKNSQDHSKEQGEIIRASALDLTI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1653 360 Pfam Myb-like DNA-binding domain 69 119 IPR001005 -
Gso18g1653 360 PANTHER - 8 360 - -
Gso18g1653 360 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Gso18g1653 360 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 122 IPR006447 GO:0003677
Gso18g1653 360 MobiDBLite consensus disorder prediction 34 51 - -
Gso18g1653 360 MobiDBLite consensus disorder prediction 1 22 - -
Gso18g1653 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 123 IPR017930 -
Gso18g1653 360 Gene3D - 66 123 - -
Gso18g1653 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 360 IPR044848 GO:0003700
Gso18g1653 360 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1653 Gso-Chr18 48440754 48442974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1653 58 130 G2-like Transcription Factor Family AT2G42660 76.712 2.05e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso18g1653 Myb_DNA-binding 1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1653 - - gmx:100802192 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1653 18 48440754 48442974 Gso7g1309 7 19006981 19009139 GST