Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1634 ATGACTGATGCAAATGCTGATTCGTTTGAGGCATTTCTCCAAGGGTGGAGGGTGCGCCAAAGAGGCTACCTTGATGAGCTTCTCTCAGCTCAGCAACACTATCACGAGCTGCAGGATGATGATGTGAAGCAATTGATCAACAGGGTCGTCTGCCACTATGGACAATACTTTGAAGAGAAATCAAAGATTGCCCACCAAAATGTTCTTCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAGAACCTTTCTTTGGGTTGGGGGGTTCAAACCTGGAGTGGCCTTTCAGGTTGTGAACGCAGCTTTGGAGGTTTTGTCAGAAGAGCAAAAGGAGAGGCTGAGTTTGCTCAACCAAGAGACCAAGGTGAAGGAGAGAGCCCTCAATGATGAGTTGGCCAAGCTTCATGAGAGTGTGGCAGCTCCACCGCTGGTGGACATGGCCAGGAGCCATGGTAGGGTGTGTTTCAGTAGGTCCTTCATGGCAGAGGGGGGTTCTTCCGTTCCAAGCACTTTCAGAGAGACATTGGAGAATCTGGTGGCAAATGCAGATGCTTTGAGGACAAACACATCTTTGAAGATTTTCCAGATACTGAGACCTTCTCAGCTTGTTTCATTCTTGGTTGCTGTGGCTGAGCTTCAGATCAGGATTGGGTCTTGGGGTTTGGACAAGGATGCCCTGAATGGAGGCCAAGGGTGA 699 0.4878 MTDANADSFEAFLQGWRVRQRGYLDELLSAQQHYHELQDDDVKQLINRVVCHYGQYFEEKSKIAHQNVLLVFSPPWFSSLERTFLWVGGFKPGVAFQVVNAALEVLSEEQKERLSLLNQETKVKERALNDELAKLHESVAAPPLVDMARSHGRVCFSRSFMAEGGSSVPSTFRETLENLVANADALRTNTSLKIFQILRPSQLVSFLVAVAELQIRIGSWGLDKDALNGGQG* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1634 232 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
Gso18g1634 232 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 5 228 - -
Gso18g1634 232 ProSiteProfiles DOG1 domain profile. 6 227 IPR025422 GO:0006351|GO:0043565
Gso18g1634 232 Coils Coil 100 120 - -
Gso18g1634 232 PANTHER - 5 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1634 Gso-Chr18 48074988 48077027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1634 8 212 Calmodulin-binding Proteins AT1G77920 29.756 7.56e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1634 - - gmx:100794752 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1634 18 48074988 48077027 Gso7g1287 7 18435126 18437245 GST