Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1630 ATGGCTAAACCAAATAATGCAAAACCTGGTTGTTTCTCTGACTTCTTTCAACTACTCTTTTGTGCTGAGGATGGAAATAGTTCTCCAATGCACCCTTCTAACCACATTACAAAACCATATGCAACAGAAGTAGTGCATAGTCACAAAGATGCAATGGCCAAAAATGCAACCAAACCAGGAGTGGTGGCAAGGCTAATGGGGCTTGATTCACTTCCAAGTACAAAATTGGTGTCAAACACAAACAACACCCCAGATTCAATTCCAAGAAGTAGGTCAGTGAACTTTGTTGATTACTTGCGCAAGTTTGACACAACAAGCCAAGCCAACCACCACCAAGTGAAAACAACCTCTGCATCATTCAGAGAGGTTCCTTCTTTGCTTCAGCACAAAAACAAAAACAATGACCTTGTTGTTTTCTACTGGAATAATGAGAGTGAAGATCAAGAAGTTGTGTCCTTTTTGAGGAAACAAGAAATGGGGTTGGGAGAATCTAGGCAGAGAAAGAAGCAGGGGAGCAAGAACAAGGAGATTGTTTCTGTGACTAAGGAGAGGAGCCACACTAAGAGAAAGAAGATTTCCAAGTTTGAGAATGAGCCTAGAGTGGTTCTTCCTCTTAAGCATAGTTCAAAGGTTCGAAATCACCATGAAACCAAAGTTTTGGCACCAGTTTCTGCATGCTCTAAGAGTTGTAGTAATAGCAGAAGAAAATGTGGTAGTGGTCCTAGTGGGTTAAGACCAAGCTCAAATTTGCCAAATAAGCAGAAGAAAGTGTTCTCTGAACCAAAATGCACGAAAAAAACAAAAAAACAACAGTCAACAAAGAAGATAGATACTGAATGTAGCACAGAGAATTTCAGTCCAATTTCAGTCCTAGATGACTATGACTATTCATTTCTTTATGGTCCTGATTTTCCAGATTACACAAACCCCGTAATGCCAAAGATAAAGTGGGAATCTTCAGAGCAACTATTCACGAGTGATAATGTTGGAGACAGAGCAAGCAAAAATAAAGGCTATTCCTACCCTGACATCAACAAGAAAGAAGAGTATTTATCAGAATTAATGGTGAAGCTTCGCAACTTAACACAAAATGAAATGAGAGAATCAGATTTCACACCAAAGCGCATGTGTGAGAGTGGAAGTTATGAGGAAATTTGTATGGAGTATGAGCATAAAATTTTTGACATTTTACTAAACGAGGTTGTCAATGAACTTGTGGAGCTTTCATATTGA 1233 0.3901 MAKPNNAKPGCFSDFFQLLFCAEDGNSSPMHPSNHITKPYATEVVHSHKDAMAKNATKPGVVARLMGLDSLPSTKLVSNTNNTPDSIPRSRSVNFVDYLRKFDTTSQANHHQVKTTSASFREVPSLLQHKNKNNDLVVFYWNNESEDQEVVSFLRKQEMGLGESRQRKKQGSKNKEIVSVTKERSHTKRKKISKFENEPRVVLPLKHSSKVRNHHETKVLAPVSACSKSCSNSRRKCGSGPSGLRPSSNLPNKQKKVFSEPKCTKKTKKQQSTKKIDTECSTENFSPISVLDDYDYSFLYGPDFPDYTNPVMPKIKWESSEQLFTSDNVGDRASKNKGYSYPDINKKEEYLSELMVKLRNLTQNEMRESDFTPKRMCESGSYEEICMEYEHKIFDILLNEVVNELVELSY* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1630 410 PANTHER ALC-INTERACTING PROTEIN 1 1 409 - -
Gso18g1630 410 MobiDBLite consensus disorder prediction 161 183 - -
Gso18g1630 410 Pfam DUF761-associated sequence motif 59 75 IPR032795 -
Gso18g1630 410 MobiDBLite consensus disorder prediction 228 270 - -
Gso18g1630 410 Coils Coil 344 364 - -
Gso18g1630 410 MobiDBLite consensus disorder prediction 228 255 - -
Gso18g1630 410 MobiDBLite consensus disorder prediction 161 192 - -
Gso18g1630 410 PANTHER OS05G0128300 PROTEIN 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1630 Gso-Chr18 48027457 48029807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1630 10 116 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 33.628 4.26e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1630 - - gmx:100775965 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1630 18 48027457 48029807 Gso7g1283 7 18374804 18377078 GST