Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1629 ATGGAGGGTCATCATCTCCATCACCGGCAACAACAATTACAACAACATCACCACCCTCATCACAACATCACAACTAGTAACGTGGATGCCACGGATAGGTTCCCCCAATGGAGCATCCAAGAGACCAAAGAGTTCCTCGTGATCCGTGCCGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTACAAGGGATGTGAAACGATGGAGCCGGAAGCGATGAGGCAGCAATTCCCGTTCTACAACGAGCTTCAAGCGATTTTCGCGGCGAGAATGCAGAGAATGTTGTGGGCGGAAGCAGAAGGAGGAGGGTCCAATAATAAGAAGAAGGGGATGCACCTTTCTTCCGACGACGAGGAAGAAGGCAATGAAGAGATGATGAGCGAGGGGGATCACAAGGGTAACATCATCATCAGCAAGAAGAACAAGAAGAAGGGAAAGATGGTAATTGGCGTCGGAGGGAGTGGTAACAACAACAATAGTAGTAGTAGTAGTAACAACTTGGAGAGTTTGAAGGAGATCATGGACGAGTTCATGAGGCAGCAGATGCAAATGGAGGCACAGTGGATGGAAGCCTTTGAGGCAAGGGAGAATGAGAGGAGGCTGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCGTTGGAGAATGAGAGGTTAATGATGGACCAAAGGTGGAGGGAGAGGGAAGAACAAAGAAGGATTAGGGAAGAAGTTAGGGCTGATAAGAGAGATGCTCTAATCACTGCTCTTCTTAACAAGCTCAGAAGAGAAGAGATGTAG 879 0.4835 MEGHHLHHRQQQLQQHHHPHHNITTSNVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFAARMQRMLWAEAEGGGSNNKKKGMHLSSDDEEEGNEEMMSEGDHKGNIIISKKNKKKGKMVIGVGGSGNNNNSSSSSNNLESLKEIMDEFMRQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERLMMDQRWREREEQRRIREEVRADKRDALITALLNKLRREEM* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1629 292 MobiDBLite consensus disorder prediction 134 162 - -
Gso18g1629 292 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 290 - -
Gso18g1629 292 PANTHER - 1 290 - -
Gso18g1629 292 Coils Coil 201 221 - -
Gso18g1629 292 CDD GT1 35 100 - -
Gso18g1629 292 ProSiteProfiles Myb-like domain profile. 37 93 IPR001005 -
Gso18g1629 292 Pfam Myb/SANT-like DNA-binding domain 36 120 IPR044822 -
Gso18g1629 292 Gene3D - 37 98 - -
Gso18g1629 292 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1629 Gso-Chr18 47996040 47997734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1629 24 290 Trihelix Transcription Factor Family AT5G01380 51.034 6.26e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso18g1629 Myb_DNA-bind_4 2.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1629 - - gmx:100794230 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1629 18 47996040 47997734 Gso7g1282 7 18344568 18346193 GST