Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1624 ATGGGTTCCAAACAACGCCTACGTGGCTCTGCCACTGCCAAAGAACGCCTACGCTGGACACAAGAACTCCATGATCGTTTTGTGGAGGCTGTAAATAGACTTGGGGGCCCTGAGAGGGCAACACCAAAAGGTATATTGAAAGAAATGAAGGCTATGGGTGTTTCAGAATTAAACATATATCACGTCAAAAGCCATTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAGTCCCCCACAAGAGGAAAGCTTGAGAAGAGAAGCATGTCAGATATACTGCCAAATTTTAGTTCTATAACTGCTCTTCAGCTAAAGGAAGTCCTTCAAATGCAGACAGGGATGCAAAATCGCCTGCGTGATAAAACAGAGGTTCAGAGAAGTTTGAAGCTAAAAATTGAAGCACAGGGAAAGTACTTCGAGAGAATTGGACAAAGTAATCATAGCAAAACAATCATTGGAAAGGCATGCAAGCCTTTTGCAACGACAATTGCATCTCTGCCTTCACTTTTTGAGGAATCTGAATCCTTGAAAACTCAACCTGAGGAAGAGCATCAATCAGCCAAAAAGCAAAAGATTTCAGGAGAGGGTGTTTTTCCAACAAGTTTTGATCATGAATCATCCACCCCACCTGAATGCTACAACGAAACCTGGGATTTTTCTTGGAGTCAACTTGCAGCAGCATGCCAATCACCTTTGGTGCCCAGTTTCTTATGA 714 0.4272 MGSKQRLRGSATAKERLRWTQELHDRFVEAVNRLGGPERATPKGILKEMKAMGVSELNIYHVKSHLQKYRISKLIPESPTRGKLEKRSMSDILPNFSSITALQLKEVLQMQTGMQNRLRDKTEVQRSLKLKIEAQGKYFERIGQSNHSKTIIGKACKPFATTIASLPSLFEESESLKTQPEEEHQSAKKQKISGEGVFPTSFDHESSTPPECYNETWDFSWSQLAAACQSPLVPSFL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1624 237 MobiDBLite consensus disorder prediction 173 209 - -
Gso18g1624 237 Pfam Myb-like DNA-binding domain 17 70 IPR001005 -
Gso18g1624 237 Gene3D - 13 74 - -
Gso18g1624 237 Pfam MYB-CC type transfactor, LHEQLE motif 103 142 IPR025756 -
Gso18g1624 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 193 IPR044848 GO:0003700
Gso18g1624 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 74 IPR017930 -
Gso18g1624 237 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Gso18g1624 237 MobiDBLite consensus disorder prediction 175 190 - -
Gso18g1624 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 193 - -
Gso18g1624 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1624 Gso-Chr18 47862320 47866556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1624 10 155 G2-like Transcription Factor Family AT4G28610 47.368 2.72e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso18g1624 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1624 - - gmx:100527384 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1624 18 47862320 47866556 Gso7g1277 7 18187391 18191836 GST