Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1599 ATGGATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCCTAATTCAACCAATTGGACCTCATTTGTTGGCACTTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTGAACCAAAAATGCGATGTGTATAGCTTTGGGGTATTAGCATTGGAAATACTTCTTGGAGAGCACCCTGGAGATTTTATAACTTCGTTGTTGACATGTTCATCAAATGCCATGGCGTCAACACTTGATATTCCTTCATTGATGGGTAAGTTAGACCAACGCCTCCCTTATCCTACAAATCAAATGGCTAAGGAGATAGCTTTGATTGCAAAGACAACAATTGCTTGCTTGACTGAAAGCCCTCATTCTCGTCCCACCATGGAGCAAGTTGCCAAGGAGCTTGGAATGTCAAAGTCATCTTCAGTGCATTAA 444 0.4167 MDLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMEVNQKCDVYSFGVLALEILLGEHPGDFITSLLTCSSNAMASTLDIPSLMGKLDQRLPYPTNQMAKEIALIAKTTIACLTESPHSRPTMEQVAKELGMSKSSSVH* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1599 147 SUPERFAMILY Protein kinase-like (PK-like) 2 137 IPR011009 -
Gso18g1599 147 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 144 - -
Gso18g1599 147 MobiDBLite consensus disorder prediction 126 147 - -
Gso18g1599 147 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 144 - -
Gso18g1599 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1599 147 Gene3D Transferase(Phosphotransferase) domain 1 1 146 - -
Gso18g1599 147 Pfam Protein kinase domain 8 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1599 Gso-Chr18 47449754 47450391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1599 1 138 Receptor kinase-like Gene Family AT1G75820 35.374 5.93e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso18g1599 Pkinase 2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1599 - - gsj:114395006 296.204