Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1594 ATGGTGTTCATATTTCCAACGTTTCATTCCATGAAGCTCCTATCATTTTGGTTGCTTCTAATAGTAATGCGGTTTGGTGCATTCATTATGGCCACTTCTCTCCTTGCTACTGCATCCTCTGCCTCACTCACACTACAACACAGTGAAGCAAAAGCTTTGTTGAAGTGGAAAGCCAGCCTTGACAACCAAAGTCAGGCTTTGTTATCTTCATGGGGTGGCAATAGTCCTTGCAGCAATTGGCTTGGAATTGCTTGTGACCACTCCAAATCTGTCTCCAACATAACTCTTAGAGGTATTGGGTTAACGGGGGATCTCTCTAGCCTTGAAGAGATGGTAAGCTTGATATCAGTTGATATATCGTACAACCAATTACAGGGTTCACTTCCAAACATTCCAGCCTTCAATAATGCTTCAATGGAGGAATTGAGAAATAATAAAGGCTTGTGTGGCAACGTCTCAAGCTTGGAACCATGCCCAACATCAAGTAACAGATCTCCAAATAATAAGACTAACAAAGTCATATTGGTATTACTACCCATTGGTTTGGGTACTTTATTACTATTATTTGCCTTTGGAGTCTCATATCATCTTTTTCGAAGCTCAAACATACAAGAACACTGTGATGCAGAATCACCAAGCAAAAATCTATTTGTGATATGGAGTTTGGATGGAAAAATGGCGTATGAGAACATAGTCAAAGCCACAGAAGAGTTTGACAATAAACATCTCATCGGGGTTGGAGGACAAGGTAGTGTTTATAAAGCAGAACTGCACACAGGTCAAGTAGTTGCTGTCAAGAAACTGCATTCAATCCAAAATGGAGAAATGTCCAATATTAAAGCTTTCACAAGTGAAATTCAAGCTTTGGCAAAAATTCGACATCGTAACATTGTGAAGTTATATGGCTTTTGTTCTCATTCACGAGTCTCATTTTTGGTGTATGAGTTCTTGGAAAAGGGAAGCATGAATAAGATTTTAAAAGATGATGAACAAGCAATTGCATTTAATTGGAATAGGAGGATGAATGCCATAAAAGATGTAGCAAATGCATTGTGCTATATGCATCATGATTGTTCTCCTCCAATTGTTCATCGAGATATATCAAGCAAAAATGTTCTTTTGGATTTGGAATATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAGCTTCTTAATCCTGATTCAACCAATTGGACCTCACTTGCTGGCACTTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTGAATGATAAAAGCGATGTGTATAGCTTTGGGGTATTAGCATTGGAAATTGTTTTTGGAGAGCACCCTGTAGATTTTATAAATTCTTCATTATGGACATCTTCATCCAATGTCATGGACTTAACATTTGACATTCCTTCCTTAATGATTAAGTTAGACCAACGTCTCCCTTATCCTACAAATCTTGCTGCTAAGGAGATAGCTTTGATTGTAAAAATAGCAAATGCTTGCTTGGCTGAAAGTCCTTCTTTGCGCCCTACCATGAAGCAAGTTGCCAAGGAGCTTGCAATGTCAAAGTCATCTTCAATCCATTAA 1566 0.387 MVFIFPTFHSMKLLSFWLLLIVMRFGAFIMATSLLATASSASLTLQHSEAKALLKWKASLDNQSQALLSSWGGNSPCSNWLGIACDHSKSVSNITLRGIGLTGDLSSLEEMVSLISVDISYNQLQGSLPNIPAFNNASMEELRNNKGLCGNVSSLEPCPTSSNRSPNNKTNKVILVLLPIGLGTLLLLFAFGVSYHLFRSSNIQEHCDAESPSKNLFVIWSLDGKMAYENIVKATEEFDNKHLIGVGGQGSVYKAELHTGQVVAVKKLHSIQNGEMSNIKAFTSEIQALAKIRHRNIVKLYGFCSHSRVSFLVYEFLEKGSMNKILKDDEQAIAFNWNRRMNAIKDVANALCYMHHDCSPPIVHRDISSKNVLLDLEYVAHVSDFGTAKLLNPDSTNWTSLAGTFGYAAPELAYTMEVNDKSDVYSFGVLALEIVFGEHPVDFINSSLWTSSSNVMDLTFDIPSLMIKLDQRLPYPTNLAAKEIALIVKIANACLAESPSLRPTMKQVAKELAMSKSSSIH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1594 521 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 101 518 - -
Gso18g1594 521 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 108 - -
Gso18g1594 521 ProSitePatterns Tyrosine protein kinases specific active-site signature. 362 374 IPR008266 GO:0004672|GO:0006468
Gso18g1594 521 ProSiteProfiles Protein kinase domain profile. 238 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1594 521 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 108 - -
Gso18g1594 521 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 101 518 - -
Gso18g1594 521 SUPERFAMILY Protein kinase-like (PK-like) 221 512 IPR011009 -
Gso18g1594 521 Pfam Protein kinase domain 239 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1594 521 Gene3D Phosphorylase Kinase; domain 1 200 316 - -
Gso18g1594 521 Gene3D Ribonuclease Inhibitor 41 109 IPR032675 -
Gso18g1594 521 Gene3D Ribonuclease Inhibitor 110 166 IPR032675 -
Gso18g1594 521 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Gso18g1594 521 Gene3D Transferase(Phosphotransferase) domain 1 317 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1594 Gso-Chr18 47256729 47260768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1594 107 410 Receptor kinase-like Gene Family AT4G08850 49.038 2.02e-95 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso18g1594 Pkinase 7.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1594 - - gsj:114395694 1000.35