Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1541 ATGTATATGTCTCCAGGCCAAGACATGTCATCCATGTCTAATGACAGAAACAACATGTCTATGATGATGCACAACAGTTTCTACTGGGGCAAAGATGCCATAGTGCTTTTCCCTAGGTGGCCTGAGAACAATGTTGGCATGTACATCTTAGCCCTAATTTTTGTGTTCTTCCTTGCCATGGCTGTTGAAGTGTTATCTAACCAACCACTCCTCAAGCCAGGGACTAGTCCCCTTGTGGGAGGACTTATTCAAGCTGGTGTCCACTTATTTCGTATCAGCTTCGTTTACATGGTTATGCTTGCCGTCATGTCCTTTAACGCCGGAATCTTCATTGCTGCTGTGGTTGGTCACACCTTGGGATTCTTCGTCGCCAAGTTTCGTGCACTTTCCATCGCCAATAGGAAAGACAAAGGGTCTTCCTCAATCTTAAACAATGTTTGA 441 0.449 MYMSPGQDMSSMSNDRNNMSMMMHNSFYWGKDAIVLFPRWPENNVGMYILALIFVFFLAMAVEVLSNQPLLKPGTSPLVGGLIQAGVHLFRISFVYMVMLAVMSFNAGIFIAAVVGHTLGFFVAKFRALSIANRKDKGSSSILNNV* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1541 146 Pfam Ctr copper transporter family 78 123 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gso18g1541 146 Pfam Ctr copper transporter family 27 66 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gso18g1541 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 3 140 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gso18g1541 146 PANTHER CTR FAMILY COPPER TRANSPORTER 3 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1541 Gso-Chr18 45913091 45914213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1541 26 137 Inorganic Solute Cotransporters AT5G59030 46.957 1.77e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1541 K14686 - gmx:100527849 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1541 18 45913091 45914213 Gso7g1192 7 16712839 16713657 GST