Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1536 ATGGAGAAATTGCAAGAAATTGCAGTGTCCTTGGCTGTTGATTATTTGCTTCCACCCTTAAAGAAAGCAGTGAATTCAGTCATGGAGGTTCCAAAAGATGCTGCAGACATGAAAGACAAACTTGATGGGATTCAAGCCATGATTCATGATGTGGACAAGATGGCAGCAACTGAAGAAGGCAACTCACGTGATGGTCTCAAAGCAAAGGTGAAGCTGCTGGTGGAAACATCTTTTTGCATGGAAGATATCGTTGATGAATACATTATCCATGAGGAAAGGCAGCTTGGTGATGATCCTGGATGTGCATCTTTACCTTGTAAGGCTATTGATTTCGTCAAAACTAGGGCCTCTCGTCTTCAATTTGCATACATGAACCAGGACGTGAAATCAGAATTTCGAGGGATCAAGGAGAGGAACAAGAGTGAGGATTGCTCCCAAATTCAATCTTCTAGAGGAAACCAAAACATCACGTTTGACAACCTTCGAATGGCTCCTCTGTTTCTTAAGGAGGCTGAGGTTGTGGGCTTTGACAGCCCTAGAGATACATTGGAAAGATGGTTGATAGAGGGGCGGGAAAAGCTCACTGTTGTCTCTGTGGTAGGAATGGGAGGACTTGGAAAAACTACTCTTGCAAAGAAAGTTTTTGATAAAGTCCAGACACACTTCACTCGCCATGTCTGGATCACAGTGTCTCAGTCATACACCATAGAAGGATTGTTGCTTAAGTTTCTAGAAGCAAAAAAAAGAAAGGATCCTTCTCAGAGTGTTTATTCTACAATGGATAAAGCATCGTTGATAAGTGAGGTGAGAAATCACTTGAGCCGCAATAGGTATGTTGTCGTGTTTGATGACGTGTGGAATGAAAATTTTTGGGAGGAAATGAAATTTGCTTTAGTTGATGTTGAAAATGGAAGTAGGATAATAATCACAACCAGGTACCGTGAGGTTGCAGAGTCTTGTAGGACATCTTCTCTTGTTCAAGTGCATGAGTTGCAACCTTTAAGTGATGACAAATCTTTCGAATTGTTTTGTAAAACGGCATTTGGATCTGAATTAGATGGGCATTGTCCAAACAATCTTAAGGACATATCAACTGAAATTGTTAGAAAGTGTGAAGGTTTACCACTAGCTATTGTGGCCACTGGTGGCCTTTTATCTCGCAAAAGTAGAGATGCACGTGAATGGCAAAGATTTAGTGAGAATCTAAGTTCAGAATTAGGAAAGCATCCCAAATTAATTCCCGTGACAAAGATTTTGGGTTTAAGTTATTATGATTTGCCTTACCATCTCAAACCATGCTTCTTGTATTTCGGAATATATCCGGAAGATTATGAAGTTGAGTGTGGGAGATTGATTCTACAATGGGTAGCTGAGGGGTTTGTCAAATCTGATGAAGCGGCACAAACTTTAGAAGAAGTGGCAGAAAAATATTTGAATGAGTTGATCCAAAGAAGTTTGGTTCAAGTATCTTCATTTACAAAGTGTGGCAAAATTAAAAGTTGTCGTGTTCATGATGTAGTACGTGAAATGATCCGCGAGAAGAATCAAGATTTAAGCTTTTGCCATTCTGCTAGTGAGCGAGGGAACTTGTCCAAAAGTGGGATGATTCGTCACCTAACAATAGCATCTGGTTCCAACAATGTGACGGGAAGTGTCGAAAGCTCGAACATTCGATCACTTCATGTTTTCGGTGATCAAGAATTGTCAGAATCCTTGGTGAAGAGTATGCCTACAAAGTACAGGTTATTAAGGGTACTTCAATTGGAAGGTGCTCCAATGTTTGATTATGTTCGGCGCATTGAAAGTTTGGGGGACTTATCATTTTTGAGGCACTTAAGCTTCAGAAGTTTAAACATAGTCCATCTTCAAAAATTAATTGGTGAGCTGCACAACCTAGAAACATTGGATCTAAGACAAACTTGTGTGCGTAAGATGCCAAGAGAGATCTACAAGCTTAAAAAGTTAAGACACCTTCTGAATGATGGATATGGCGGGTTTCAAATGGATAGTGGCATTGGAGATCTAACATCCCTACAAACACTACGTGAAGTGGACATAAGCCATAATACAGAAGAAGTAGTAAAAGGGTTGGAAAAACTTACACAATTAAGGGTGTTGGGCTTGACAGAAGTTGAGCCAAGATTCAAAAGTTTTCTGTGCTCCTTGATAAACAAGATGCAACTCCTGGAGAAGTTATCCATTACTGCAACTGCAAGTTATGGTATGGACATGGATTTGCATTTTGATGTATTTGCACCTGTACTTCAGAAGGTTCGTCTTGTGGGGATGTTAAATGAGTTCCCAAACTGGGTTGCCAAGCTCCAAAATCTTGTTACGTTGTACTTGTCATGCACCCAGTTGACACATGATCCGTTGCCACTGCTTAAAGATCTACCAATTTTGACGCACCTTAGTATCAATTTTGAAAACTATGGTGAAGTTTTGCAGTTTCCAAACAGGGGGTTTCCGAACCTAAAGCAAATACTACTGGAAGAGTTGATTAGATTGAAATCCATCGTTATTGAAGATGGAGCATTGCCTTCTCTCGAAAAGCTCAAGTTAGTCCGTATTTTAGAACTGACAGAGGTGCCTCGTGGTATTGACAAGTTACCAAAGCTTAAGGTGTTGTTTCTTACGTACAAGGTCATGCATGGCGCCACCACCACTGGCGCCTTCGATAGGGACGAGCCACGTGGCTGTGGAAGCGCCATTCCCACTAGCGCGTCCCCTTTTGTTGAGGTGGCTTTGGAAGCGCCAGCACTAGTGGCGATTTGGTGA 2778 0.4122 MEKLQEIAVSLAVDYLLPPLKKAVNSVMEVPKDAADMKDKLDGIQAMIHDVDKMAATEEGNSRDGLKAKVKLLVETSFCMEDIVDEYIIHEERQLGDDPGCASLPCKAIDFVKTRASRLQFAYMNQDVKSEFRGIKERNKSEDCSQIQSSRGNQNITFDNLRMAPLFLKEAEVVGFDSPRDTLERWLIEGREKLTVVSVVGMGGLGKTTLAKKVFDKVQTHFTRHVWITVSQSYTIEGLLLKFLEAKKRKDPSQSVYSTMDKASLISEVRNHLSRNRYVVVFDDVWNENFWEEMKFALVDVENGSRIIITTRYREVAESCRTSSLVQVHELQPLSDDKSFELFCKTAFGSELDGHCPNNLKDISTEIVRKCEGLPLAIVATGGLLSRKSRDAREWQRFSENLSSELGKHPKLIPVTKILGLSYYDLPYHLKPCFLYFGIYPEDYEVECGRLILQWVAEGFVKSDEAAQTLEEVAEKYLNELIQRSLVQVSSFTKCGKIKSCRVHDVVREMIREKNQDLSFCHSASERGNLSKSGMIRHLTIASGSNNVTGSVESSNIRSLHVFGDQELSESLVKSMPTKYRLLRVLQLEGAPMFDYVRRIESLGDLSFLRHLSFRSLNIVHLQKLIGELHNLETLDLRQTCVRKMPREIYKLKKLRHLLNDGYGGFQMDSGIGDLTSLQTLREVDISHNTEEVVKGLEKLTQLRVLGLTEVEPRFKSFLCSLINKMQLLEKLSITATASYGMDMDLHFDVFAPVLQKVRLVGMLNEFPNWVAKLQNLVTLYLSCTQLTHDPLPLLKDLPILTHLSINFENYGEVLQFPNRGFPNLKQILLEELIRLKSIVIEDGALPSLEKLKLVRILELTEVPRGIDKLPKLKVLFLTYKVMHGATTTGAFDRDEPRGCGSAIPTSASPFVEVALEAPALVAIW* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1536 925 Pfam NB-ARC domain 181 422 IPR002182 GO:0043531
Gso18g1536 925 Gene3D - 7 122 - -
Gso18g1536 925 Gene3D - 160 329 IPR027417 -
Gso18g1536 925 Gene3D - 333 422 IPR042197 -
Gso18g1536 925 Gene3D Ribonuclease Inhibitor 565 739 IPR032675 -
Gso18g1536 925 Gene3D Ribonuclease Inhibitor 746 889 IPR032675 -
Gso18g1536 925 PANTHER DISEASE RESISTANCE PROTEIN RP 32 876 IPR044974 GO:0006952
Gso18g1536 925 PANTHER - 32 876 - -
Gso18g1536 925 Gene3D - 423 516 IPR036388 -
Gso18g1536 925 PRINTS Disease resistance protein signature 196 211 - -
Gso18g1536 925 PRINTS Disease resistance protein signature 272 286 - -
Gso18g1536 925 PRINTS Disease resistance protein signature 371 385 - -
Gso18g1536 925 PRINTS Disease resistance protein signature 627 643 - -
Gso18g1536 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 437 IPR027417 -
Gso18g1536 925 SUPERFAMILY L domain-like 502 880 - -
Gso18g1536 925 Pfam Rx N-terminal domain 8 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1536 Gso-Chr18 45783803 45788349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1536 172 390 WRKY Transcription Factor Family AT5G45050 29.224 7.65e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1536 K13457 - gmx:102667903 1790.01