Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1533 ATGGAATCGGAGTGCAGCCATAGCAGCAGCAAATGTCTTATACTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGAGCTACCCATTACTCAACAGTCAACAAGTGGTCCGTTGGCTACATATTTGCTGAACTTGTCACCAAACAACCACTCTTTCTAGGTGATACCGAGCTGCGACAACTCCTTCGTATATTCAGGACCATGGCTACTCCACCTGCCTCGCCTCCTCCTCCTGCAGACGCATAA 249 0.494 MESECSHSSSKCLILTLWYRAPEVLLGATHYSTVNKWSVGYIFAELVTKQPLFLGDTELRQLLRIFRTMATPPASPPPPADA* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1533 82 PANTHER CELL DIVISION PROTEIN KINASE 14 75 - -
Gso18g1533 82 SUPERFAMILY Protein kinase-like (PK-like) 11 74 IPR011009 -
Gso18g1533 82 PANTHER CYCLIN-DEPENDENT KINASE B1-1 14 75 - -
Gso18g1533 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1533 82 Pfam Protein kinase domain 10 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1533 82 Gene3D Transferase(Phosphotransferase) domain 1 12 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1533 Gso-Chr18 45707066 45714667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1533 14 72 Core Cell Cycle Gene Families AT1G20930 80.000 2.63e-27 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso18g1533 Pkinase 2.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1533 K07760 - gsj:114396744 143.665