Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1530 ATGGCAGCTAGTCAGGAAGATGTGAAGCTTTTGGGAGTTTTGGGAAGCCCATTTGTGTGTAGGGTCCAGATTGCCCTCAAGTTGAAGGGAATTGAATACAAATTTGTGGAAGAAAATTTGGCCAACAAGAGTGATTTGCTTCTCAAATCCAACCCAGTTCACAAGAAAGTTCCAGTTTTTATTCACAACGAGAAGCCCATAGCAGAGTCTCTTGTGATTGTTGAGTACATTGATGAGACATGGAAGAACAACCCCATCTTGCCTTCTGATCCTTACCATAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATTGATGACAAGGTTTTTGGTGCTGCATGGAAATCTGTTTTCACTCTTGATGAGAAAGAGCGTGAGAAGAATGTTGAAGAATCATTGGAGGCTCTTCAGTTTCTTGAGAATGAGTTGAAGGACAATAAGTTTTTTGGAGGAGAGGAATTTGGGTTGGTAGATATTGCAGCTATTTTCATAGCATTTTGGATTCCAATTTTTCAGGAAATAGCAGGGTTGCAGATATTCACAAGTGAGAAATTCCCTAAGCTCTACAAATGGAGCCAAGAGTTCATGAGCCACCCTGTTGTGAAAGAAGTCCTTCCTCCTAGAGACCCACTTTTTGCCTTCTTCAAGGCCCGCTATGAAAGTCTTTCTGCTTCAAAATAG 678 0.4159 MAASQEDVKLLGVLGSPFVCRVQIALKLKGIEYKFVEENLANKSDLLLKSNPVHKKVPVFIHNEKPIAESLVIVEYIDETWKNNPILPSDPYHRALARFWSKFIDDKVFGAAWKSVFTLDEKEREKNVEESLEALQFLENELKDNKFFGGEEFGLVDIAAIFIAFWIPIFQEIAGLQIFTSEKFPKLYKWSQEFMSHPVVKEVLPPRDPLFAFFKARYESLSASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1530 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Gso18g1530 225 CDD GST_N_Tau 8 81 - -
Gso18g1530 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Gso18g1530 225 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
Gso18g1530 225 SFLD Glutathione Transferase (cytosolic) 5 223 IPR040079 -
Gso18g1530 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Gso18g1530 225 Gene3D Glutaredoxin 1 89 - -
Gso18g1530 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Gso18g1530 225 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Gso18g1530 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Gso18g1530 225 Gene3D - 90 225 - -
Gso18g1530 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Gso18g1530 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Gso18g1530 225 Coils Coil 121 141 - -
Gso18g1530 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1530 Gso-Chr18 45642721 45643972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1530 4 224 Glutathione S-transferase Gene Family AT3G09270 55.157 4.13e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1530 K00799 - gmx:100500680 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1530 18 45642721 45643972 Gso7g1182 7 16565052 16566421 GST