Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1508 ATGGATGCCACTTCTATAATGCATTTGTTGAAGGGCTTTTGTGATCACACACAATGGAAATATGCTGGTTTTTGGAAGCTTGACCAACATTTTCCTATGACGTTGACCTGGGAAAATGGTTACCAGAAAAGAGATGAGGTTAAGGAAAGTATGTGGGGTGACCTCAGTTTCAAATCCCCAGATGAGTTATATTCTTCAAGCGGTGAAAATTCTGATTATTCGGCTCGATTACTCTTGATTGAAATGTCTCATCGCAAATACAGTTTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTCGCCAGGGATCATTGTTGGGTTTCATATGAGGATATTCTCACCAGTAAATTTGACACAGATTTAATCACTGAGTGTCCTGATGAGTGGCTGCTTCAATTTGCATGTGGCATCAAGACTATTGTGCTTGTACCAGTGCTTCCACAAGGGGTTTTGCAATTCGGTTCATTTGAAGCGGTTGCTGAAGACAAGGAATTTGTTACCAATATCAAGGAGAAATTCTATTCCACTCATTATCTGGAAGCAGATATTACCCCTTTAAATTTGGGAACTGATTGTCAAGATGTGTCATTCTCAGACCTAATGCATAATTTGATGGGCAGTTTGGATGAATCATCATCTTCTGTTACAAAAAGTATATTGAAAAGTGAAGTTTCAACTAGTCCTGCTGCCCTCAATTCAAATGGTTCAAGGTTGAACCCGACTATGCTATCATTTATTCAGGATGACTGTTTCTTTTCTAGAGAAAATTTACTAGAATCTCTGAAAAGAGAAAATGAAAATGAGATAGGTTCCTCATCAACTGAGATGCCAAGACATATCGGTAAGGTGGAGACAAAACCTAATCATATGGAAGAGATATGGTCCTGGTCTCACTTGCTCAACAATGTTGGAGTATTTAGAGAGATGTCAAATGGATTAGACTCTTCCTCGGTTATAAATACGACACAGAAACAACTTGGAGGCATTGAAACTGGCCATGATGCTAAGAATGTGAATGACTTCGCTTTTCCCTCAGAGTCTGAATTCCGCAAAGCACTTGGATCAGTTTCATATGGAGAGACAGGCAAATTTATGTCAAAATGTATCTCTGTTGAGGAAACATACAGTAACTCAACTCTTGTAATCAACAAAAAAGAGCATGATCATATTAAAGGTTTGGAGTTTCCCAAAGATGTTGATCTGGAATATCTTTTAGATGCTGTTGTTGGCAATTTTTGTGGTGCTGCTGCTGATACTTCAAGTATATCCAACAGTGTTAGGTCTCTTACAACCATGCCAACAGAGTTTACCAGTTCCATTCAGCCAGAAAATTATTCAGAAGAAAGCACTTTGATTGTGGATAGTTCAGATGTGAAAAATGATCTTATGCCTGCAATCATGGTCAAGGGAAAAGATGAATTTTCTAACCATTTTACATCATCTTTTGATGGAAATGCAAGCTTATTGATTGACAAGGCACAACAGGAAAAGGCTAATAGTCATATGCAGCCTATTGGTGGACCAAAGCTCTCTAGCTCAAGCAAGAAAAGAACAAGAGTTGGTAACAACCAAAAGTCAAGGCCAAGAGATAGACAGCTGATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCAGAAGGTGGTAGGTGTAGTATTGACAACCTCTTGGAACGTACCATAAAGCACATGCTGTACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGAATTGCTAATCGGGCGGTTCCCGAGTGCAAAAGACAGAAAGTCAATGCTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAAGTATCCTGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAACGAGCATGGACTCTTCTTGGAGATTGCTCAGGTGATCCGGAAGCTGGATGTCATCATCTTGAAAGGGATCTTGGAAAACTGTTCCAGCAACAGTTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTCTATGTCCTTTACTGCATCTTCTGCAGCTTAGGAGAAACCCTGTCTCTTGTAAAAGCTGA 2097 0.403 MDATSIMHLLKGFCDHTQWKYAGFWKLDQHFPMTLTWENGYQKRDEVKESMWGDLSFKSPDELYSSSGENSDYSARLLLIEMSHRKYSLGEGVVGKIALARDHCWVSYEDILTSKFDTDLITECPDEWLLQFACGIKTIVLVPVLPQGVLQFGSFEAVAEDKEFVTNIKEKFYSTHYLEADITPLNLGTDCQDVSFSDLMHNLMGSLDESSSSVTKSILKSEVSTSPAALNSNGSRLNPTMLSFIQDDCFFSRENLLESLKRENENEIGSSSTEMPRHIGKVETKPNHMEEIWSWSHLLNNVGVFREMSNGLDSSSVINTTQKQLGGIETGHDAKNVNDFAFPSESEFRKALGSVSYGETGKFMSKCISVEETYSNSTLVINKKEHDHIKGLEFPKDVDLEYLLDAVVGNFCGAAADTSSISNSVRSLTTMPTEFTSSIQPENYSEESTLIVDSSDVKNDLMPAIMVKGKDEFSNHFTSSFDGNASLLIDKAQQEKANSHMQPIGGPKLSSSSKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPEGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRIANRAVPECKRQKVNASHPGRSCAFDFESEVSWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVIILKGILENCSSNSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPVSCKS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1508 698 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 517 566 IPR011598 GO:0046983
Gso18g1508 698 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 697 - -
Gso18g1508 698 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 697 IPR043561 GO:0003700|GO:0006355
Gso18g1508 698 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 172 IPR025610 -
Gso18g1508 698 MobiDBLite consensus disorder prediction 494 518 - -
Gso18g1508 698 MobiDBLite consensus disorder prediction 494 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1508 Gso-Chr18 44716469 44722870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1508 397 692 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.383 8.54e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1508 - - gmx:100776855 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1508 18 44716469 44722870 Gso7g1160 7 16173158 16179490 GST