Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1498 ATGGCTACCCTTTTGAAAATTTTATCTCTTACGGTGCTCCTTTTGATCCCAGTTTCATGCCAAGTTGACCAGCTTCTCTATGCTGGATTCAAGGATGTTGGTGCTAGCAACCTAACCATGAATGGGGTGGCTAAAATAGAACATAATGGAATACTCAAATTGACAAATGACTCCAGCAGGTTAATGGGTCATGCTTTTTACCCATCACCTTTTCAACTAAAGAACTCCACAAGTGGTAAAGTTCTCTCCTTTTCTTCCTCTTTTGCTCTAGCTATTGTCCCTGAGTACCCCAAGCTAGGTGGCCATGGCTTAGCTTTCACAATAGCAACTTCTAAGGATCTCAAGGCTCTACCTAGCCAGTACCTTGGCCTCCTTAATTCAAGTGATAATGGTAACATCTCCAACCACATCTTTGCTGTTGAGTTTGACACTGTGCAAGACTTTGAGTTTGGGGACATTAATGACAACCATGTTGGAATAGACATCAATAGCATGCAGTCCAATGCTTCTGCCAATGTTAGTTTGGTTGGTCTCACTCTCAAAAGTGGGAAACCGATTCTAGCTTGGGTTGATTATGATTCTCAATTGAATCTTATAAGTGTTGCACTTTCTCCAAATTCATCCAAGCCCAAAACCCCACTCTTAACCTTTAATGTGGATCTTTCACCCGTTTTTCATGATATTATGTATGTTGGGTTCTCTGCATCAACTGGTTTGCTTGCTAGCTCTCATTACATCTTGGGTTGGAGCTTTAAAATCAATGGTCCAGCACCACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCTCAGCCAAAGAAGAAACAAACATCTTTGATAATTGGGGTTTCTGTCTCAGTTTTTGTTATTGTGTTATTAGCCATCTCTATTGGCCTTTACTTCTACAGAAAAATCAAGAATGCTGATGTGATTGAAGCATGGGAGCTTGAAATTGGGCCACATAGGTACTCCTACCAAGAGCTCAAGAAGGCCACTAGAGGTTTCAAGGACAAAGAACTTCTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGAACATTGCCAAATTCCAAGATCCAAGTAGCCGTGAAACGAGTTTCGCACGAATCCAAGCAGGGCCTTAGGGAATTCGTGTCAGAAATCGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAATTGCTCGGCTGGTGTCGCCGCCGGGGCGACCTCTTGCTTGTGTATGATTTCATGGCCAATGGGAGCTTGGACAAGTACTTGTTTGATGAGCCAAAGATTATCCTAAATTGGGAGCACAGGTTCAAGATCATAAAGGGTGTAGCTTCAGCTCTTTTGTATCTACACGAGGGCTATGAGCAAGTGGTGATACATAGAGATGTGAAAGCTAGCAATGTGCTGCTAGATTTTGAGCTTAATGGAAGATTAGGTGATTTTGGATTAGCAAGATTGTATGAACACGGGGCTAACCCAAGCACCACAAGAGTGGTGGGTACATTAGGCTACTTGGCACCTGAGTTGCCTAGAACAGGAAAGGCAACAACAAGCTCAGATGTTTTTGCATTTGGGGCACTATTGCTTGAGGTGGCTTGCGGGCGCAGGCCGATCGAGCCTAAGGCATTGCCAGAAGAGTTGGTGTTGGTGGATTGGGTGTGGGAAAAGTACAAACAAGGGAGAATACTTGATTTGGTGGACCCAAAACTAAATGGCTATTTTGATGAGAAGGAGGTGATAGTGGTGCTGAAATTGGGGTTGATGTGCTCAAATGATGTGCCTGTTACTAGGCCTAGCATGAGGCAAGTGGTGAGGTATTTGGATGGGGAAATTGAGGTGCCAGAGGACTTGAAAAAGCCAGGGGATATAAGTCACCATGAGGGGTTTGATGAGTTCTTGCACTCACTTGCATCTTCATCCTTTGATAAGATGAGTTCAGGCTCCAATTTTGGAAATAGAGACATGGAGTCTAGTTTTCTTTCCTTTGCTAATTCACCTCATTCCCTTCTCCATGGCAGAGGGGAAACTAGGTGA 2025 0.442 MATLLKILSLTVLLLIPVSCQVDQLLYAGFKDVGASNLTMNGVAKIEHNGILKLTNDSSRLMGHAFYPSPFQLKNSTSGKVLSFSSSFALAIVPEYPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSDNGNISNHIFAVEFDTVQDFEFGDINDNHVGIDINSMQSNASANVSLVGLTLKSGKPILAWVDYDSQLNLISVALSPNSSKPKTPLLTFNVDLSPVFHDIMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPQLPQPKKKQTSLIIGVSVSVFVIVLLAISIGLYFYRKIKNADVIEAWELEIGPHRYSYQELKKATRGFKDKELLGQGGFGRVYKGTLPNSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPKIILNWEHRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVFAFGALLLEVACGRRPIEPKALPEELVLVDWVWEKYKQGRILDLVDPKLNGYFDEKEVIVVLKLGLMCSNDVPVTRPSMRQVVRYLDGEIEVPEDLKKPGDISHHEGFDEFLHSLASSSFDKMSSGSNFGNRDMESSFLSFANSPHSLLHGRGETR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1498 674 Pfam Protein kinase domain 334 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1498 674 Pfam Legume lectin domain 25 265 IPR001220 GO:0030246
Gso18g1498 674 Gene3D Phosphorylase Kinase; domain 1 319 410 - -
Gso18g1498 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 273 IPR013320 -
Gso18g1498 674 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Gso18g1498 674 CDD STKc_IRAK 340 606 - -
Gso18g1498 674 SUPERFAMILY Protein kinase-like (PK-like) 316 624 IPR011009 -
Gso18g1498 674 PANTHER - 6 658 - -
Gso18g1498 674 SMART serkin_6 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1498 674 CDD lectin_legume_LecRK_Arcelin_ConA 24 255 IPR001220 GO:0030246
Gso18g1498 674 Gene3D Transferase(Phosphotransferase) domain 1 411 620 - -
Gso18g1498 674 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 658 - -
Gso18g1498 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Gso18g1498 674 Gene3D - 25 257 - -
Gso18g1498 674 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1498 Gso-Chr18 44286266 44288677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1498 18 660 Receptor kinase-like Gene Family AT3G55550 59.517 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso18g1498 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1498 - - gmx:100784346 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1498 18 44286266 44288677 Gso7g1152 7 16046469 16049087 GST