Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1497 ATGTCTCTCAAGGTTGTAACAGTGGTGTTTTTGCTGGCAACAATAGTAGTAGCCAGTGATGACACCAGTTTCACCTATAATGGATTCCAATCTTCTTATTTGTACCTTGATGGAAGTGCTGAGTTCACCACCAATGGCATGCTTAAGCTCACCAATCACACCAAGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGTCTTCAAGAACACCACAAGTGGAAGTGTGTTTTCTTTCTCCACCACTTTTGTGTTTGCCATAAGGTCTGAGTTTCCCAATTTGAGTGGTCATGGGATTGTGTTCGTGGTTTCTCCAACAAAAGGGGTTCCACATTCTCTTCCAAGCCAGTACCTTGGCCTCTTTGATGACACCAACAACGGCAACAATAGCAACCATATTTTTGGGGTGGAGCTTGATACAATTCTGAACACCGAGTTTGGTGATATCAATGACAACCATGTTGGAGTTGATGTTAATGAATTGAAGTCGGTTAAATCAGCTGCTGCAGGGTATTACAGTGATGAGGGGTTTAAGAATTTGAGTCTCATCAGTGGCTACCCAATGCAGGTGTGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAATGTCGGTAAACCGGAAGGCCCTTTATTATCATTGAGCAAAGACCTTTCTCCAATTCTGAACAGTAGCATGTATGTTGGATTCTCATCCTCAACTGGGTCAATTCTAAGTTCTCATTATGTTTTGGGTTGGAGCTTTAAGGTGAATGGCAAGGCTCAACAGCTTGCAATCTCTGAACTCCCTATGCTACCTAGACTAGGTGGTAAAGAAGAGTCAAAGGTTCTTATTGTAGGGTTGCCTCTGATATTACTCAGTTTGATTCTCATGGTGGCTCTAGCAGTGGTTCATGTCATCAAGAGGAAGAAGTTCACGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCTGGCAACAAAGGGGTTCAGGGAGAAGGAGCTGTTGGGGAGTGGTGGATTTGGTAGAGTCTACAAAGGGGTGATGCCAATTTCCAAAATTGAGGTGGCAGTGAAGAAGGTGTCCCGTGAATCAAGGCAAGGGATGAGGGAATTTGTGGCAGAAATCGTTAGCATTGGCTGTCTCAGGCACCGGAATTTGGTTCCCCTTCTGGGGTACTGCAGGCGCAAAGGAGAGTTGCTATTGGTCTATGACTACATGCCAAATGGAAGCCTTGACAAGTATCTCTACAACAAACCAAGAGTGACCTTAAATTGGAGCCAGAGGTTTAAAATCACAAAAGGGGTTGCTTCAGGTCTGTTTTATCTACATGAGGAATGGGAGCAAGTTGTGGTCCACAGAGACATTAAGGCTAGCAATGTGCTACTTGATGCTGAATTGAATGGTAGATTAGGGGACTTTGGTCTTTCAAGGTTGTATGAACATGGAACTGATCCTCACACTACTCATGTGGTTGGAACTCTTGGTTATCTTGCACCTGAGCACACTAGAACGGGTAAGGCAACTACAAGCTCTGATGTGTTTGCTTTTGGTGCATTTATGCTAGAGGTTGTGTGTGGAAGGAGGCCAATAGAGAAAGGAGGGGAATCCGGGAGCGAAATTCTGGTCGATTGGGTGTATAATTGTTGGAAAAAGGGTGAGATTCTTGAGTCAATGGATCCAAACTTGGGCGCAAATTATAGGCCAGATGAGGTGGAATTGGTGTTGAAACTCGCCTTGTTGTGCTCACATTCTGAGCCTTTGGCTAGGCCAAGCATGCGCCAGGTTGTGCAATACTTGGAGAAAGATGTGCCTCTGCCTGATTTGTGTATGCTTAGCTTATCTTCAAATGGCTTAACTTTTGGTTTGCATGAAGATTTTCAGGACTGTCCAATGTCTTATCCTTCATCTATGAATAGGCCAATATCTCATACTTCTTCAATTGTTGAATCACTTCTCTCTGGGGGTCGTTGA 2004 0.4406 MSLKVVTVVFLLATIVVASDDTSFTYNGFQSSYLYLDGSAEFTTNGMLKLTNHTKQQKGHAFFPSPIVFKNTTSGSVFSFSTTFVFAIRSEFPNLSGHGIVFVVSPTKGVPHSLPSQYLGLFDDTNNGNNSNHIFGVELDTILNTEFGDINDNHVGVDVNELKSVKSAAAGYYSDEGFKNLSLISGYPMQVWVEYDGLKKQIDVTLAPINVGKPEGPLLSLSKDLSPILNSSMYVGFSSSTGSILSSHYVLGWSFKVNGKAQQLAISELPMLPRLGGKEESKVLIVGLPLILLSLILMVALAVVHVIKRKKFTELLEDWEQDYGPHRFKYKDLSLATKGFREKELLGSGGFGRVYKGVMPISKIEVAVKKVSRESRQGMREFVAEIVSIGCLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNKPRVTLNWSQRFKITKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLSRLYEHGTDPHTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFMLEVVCGRRPIEKGGESGSEILVDWVYNCWKKGEILESMDPNLGANYRPDEVELVLKLALLCSHSEPLARPSMRQVVQYLEKDVPLPDLCMLSLSSNGLTFGLHEDFQDCPMSYPSSMNRPISHTSSIVESLLSGGR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1497 667 CDD lectin_legume_LecRK_Arcelin_ConA 22 259 IPR001220 GO:0030246
Gso18g1497 667 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1497 667 Pfam Legume lectin domain 22 269 IPR001220 GO:0030246
Gso18g1497 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 276 IPR013320 -
Gso18g1497 667 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1497 667 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 5 647 - -
Gso18g1497 667 CDD STKc_IRAK 346 612 - -
Gso18g1497 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Gso18g1497 667 SUPERFAMILY Protein kinase-like (PK-like) 321 622 IPR011009 -
Gso18g1497 667 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Gso18g1497 667 Gene3D - 19 269 - -
Gso18g1497 667 PANTHER - 5 647 - -
Gso18g1497 667 ProSitePatterns Protein kinases ATP-binding region signature. 346 370 IPR017441 GO:0005524
Gso18g1497 667 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1497 667 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1497 Gso-Chr18 44264426 44266813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1497 18 667 Receptor kinase-like Gene Family AT2G37710 63.053 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso18g1497 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1497 - - gmx:100783815 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1497 18 44264426 44266813 Gso7g1151 7 16037133 16039475 GST