Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1491 ATGAGAATGGGGAACCTCTTATGGCTTTGCATTGTTGCAACACTTGTTTTCAGCTTCTGGGTTGATTCCTTTTCTGCATATGAATATCACCACTTCAATGAAACCGAGTTCTCTTTATTGGAGTCTCAAGAACAGGTACATTCATCCCTCCTTGGGAGAACATCTGTCATGGTTGGACTCACAGTTATTCAAAGTGCTGCTGGCAAAGGAGCAGTTTGCTTGGATGGAACATTGCTTGCTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACAGCGTGGGTCATCAACATTCATGGAAAAACAAATACCTTTTACTGGAATATTAAGCAATAATGTTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGATGCTGAAGATAAGGTAGATTTTGATGTGTTGGAGTTATTGAAAATTGAAACGGTGTTTAATTCTGTGGAGGCTGACAAGAAGATGAAATAA 579 0.399 MRMGNLLWLCIVATLVFSFWVDSFSAYEYHHFNETEFSLLESQEQVHSSLLGRTSVMVGLTVIQSAAGKGAVCLDGTLLAYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTQRGSSTFMEKQIPFTGILSNNVEDNPDFFNWNRVKIRYCDGASFAGDAEDKVDFDVLELLKIETVFNSVEADKKMK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1491 192 Pfam Pectinacetylesterase 54 169 IPR004963 GO:0016787
Gso18g1491 192 PANTHER PECTIN ACETYLESTERASE 4 168 - -
Gso18g1491 192 PANTHER NOTUM-RELATED 4 168 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1491 Gso-Chr18 44087411 44089904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1491 2 168 Carbohydrate Esterase AT1G57590 56.977 1.02e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1491 K19882 - gsj:114395953 397.897