Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1481 ATGGTTGAGTTAGCCATGTCAAAAACAATGATGGAGGAAGTAGTAATGACAACTTCTTGGTCAGAGGGTTCAGAGGATGATGACCTTGTGAGAGAGCTTTTAGATGATGGGTCTCCCCTTCTTATTGAACCCCCCAACACAACAACAAAAGCCTCTTCAAGTGATGACCAAGACCAAGCCTTTAATAAGTTCATCTCCAACATTTACTCAGGACCTACCATTTCAGATATTGAAAATGCTTTGTCAGTGACCAACCAAAGAGACCATTTCCCACAACTCTCATCGGCCAGAGTTTCCATATTGGAAAGGGGTTTGAGTAAGATTGAGAATAAGTATACCCTGAAAATCAAATGCTTTGGCAACGTGATGGGTGATGATGGATATAAGTGGAGAAAGTATGGACAGAAATCAATTAAGAATAGCCCAAATCCTAGGAGTTATTATAGGTGCACCAATCCAAGGTGCAGTGCCAAGAAGCAAGTAGAGAGATCCAATGAGGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTACCCGTATTTTCTCATGGGCCAACTTCAGCAATCTAATTCCCACCCACCAATCAAGAAGTCCAAGCCCATCTCTCCACAGGCTCAGGCCCAAGCCCATAGAGAAGACTATGTTCAGGAAGCCCAATCAAATGCTACTTGGGGCATGATGTCATCCACTTCATTGGACTCTACACTAGAGATGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTCGGAACCCGTCAAACAATGTCAATAGTGCTCACACAAAATTTTCTTGTTCTTCGTACAGTTCTCCTCCAACATCTCCTCTTTGGACTTCAACTTACTCCACCACTTGCTATACCGTTGGCTTAAATTCTAGCACTTAA 927 0.4326 MVELAMSKTMMEEVVMTTSWSEGSEDDDLVRELLDDGSPLLIEPPNTTTKASSSDDQDQAFNKFISNIYSGPTISDIENALSVTNQRDHFPQLSSARVSILERGLSKIENKYTLKIKCFGNVMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMGQLQQSNSHPPIKKSKPISPQAQAQAHREDYVQEAQSNATWGMMSSTSLDSTLEMAQENLGSQGLLEDMVPFMVRNPSNNVNSAHTKFSCSSYSSPPTSPLWTSTYSTTCYTVGLNSST* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1481 308 Pfam WRKY DNA -binding domain 125 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1481 308 SUPERFAMILY WRKY DNA-binding domain 122 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1481 308 Gene3D WRKY domain 116 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1481 308 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 23 278 - -
Gso18g1481 308 SMART WRKY_cls 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1481 308 ProSiteProfiles WRKY domain profile. 123 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1481 308 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 278 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1481 Gso-Chr18 43824609 43828448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1481 39 265 WRKY Transcription Factor Family AT5G43290 43.902 2.95e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g1481 WRKY 6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1481 - - gmx:100803946 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1481 18 43824609 43828448 Gso7g1139 7 15869961 15873392 GST