Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1477 ATGCAAAGATTGATGATAATGGATCCTCGTCTTCTTGGGTTTAGTGGTTCCCCTAATGAAATCCAGTTGGGAAATCAGAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAGTCCAATCTACTACCAACTGACACACCTTCTTCATCCTCGGTTTGGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGTTACAAGATTCATTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTAATTGGTGAAAAGTACCCTTCTTCGCCTTTAGGGCATCCAAGTTCTGTTGATCCAGATGATGGGGGTGGGGTGGATAATTTCTCTGAAAATTATGGTACTTGTTCTTACAATGATGGTGACCTCAGTAGCATTTTTACTAACAATTCTTTGCGCCGAAATTTGGGGGAACTTCCTAACCAGAATTTTCGAGGCAATAGCATTTCCCGGTCATCTTATAGCTCTCCAAATAGTGTCATAAGTAGTGTGGAAGGGCCTGTAGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGACTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGGTGTGGCTAATTTTTCAAAACTAGAGCCTAGAGTGGGGAGTGATGAATTGCCTGTTAAGGTGGAGAAGGACGAGGGTGAGTCTTTTCCTGCTGGATCCAAAATAAGGAAGCATCATCACAGGGAAGAGGGGGGTGTTGAAGAAAATAGAAGCAGCAAGCAAGCCGCAATTTTCTCTGAACCTACATTGCGATCATCCATGATTGATATAATCCTGCTTCATAGTTTAGGGGATGGCAAGAAGCATTTTATGGCCCGCCGTGAGGCCTTGCAAACCAAGAATGAGAAGATAGTGGTGTCAAATGGTAAATCAAAGGCTTCCAATGGTGGCAAGGGGCGTAGTAAGAAACAAAATGGGAAAAAGGAGGTGGTAGATTTGAGAACACTTTTGGTTCTTTGTGCTCAGGCTGTTGCTGCAGATGACTATAAAGGTGCAAACGAGTTGCTAAAGCAGATCAGGCAGCACTCAAACCCTTTTGGGGATGGGAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGTCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCGGCTGCTGATTTTCTGAAGGCCTATCATCTATATCTTGCTGCTTGCCCTTTTAGGAAGATGACTGCTTTTATCTCTAATGTTACAATAAGGAAATCTTCAGCAAATTCAGCAAGACTCCATATTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTTCATTAGCAGGAGGAGCACCTAAACTCCGGATTACTGGAATAGACTCCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGACGCCGCTTGGCGGCATATGCTGAATCATTTAAGGTGGAATTTGAGTACAATGCTATAGCTAAAAAATGGGAAACAATTCAACTTGAGGAACTCAAGATTGATAGGGACGAGTACCTCGTTGTTACCTGTTTTTATCGTGGTAAAAATGTGCTGGATGAATCTGTGGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGATCAACCCGAATATATTCATTCATGGCATTACTAACGGGGCCTTCAATGCGCCTTTTTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTCTTTGACATGCTTGAAGCCATTGTTTCTCGCGAGGAATGGGAGAGGATGCTCATTGAGAAAGAAATATTTGGTAGGGAAGCATTGAATGTCATAGCATGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCCCGAATTCTAAGGGCTGGATTTTTGCAACAACCTTTTGAGCGTGAGATAGTAAAGAGGGCAATAGAGAAAGTAACAACTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGGTTGTTGCAAGGTTGGAAGGGGCGAATCATTTATGCCCTTTCTTGTTGGAAACCTGCATGA 2214 0.4246 MQRLMIMDPRLLGFSGSPNEIQLGNQRFENGFFDQSREFGYLQSNLLPTDTPSSSSVWTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMLQDSLDLQIAERSFYEVIGEKYPSSPLGHPSSVDPDDGGGVDNFSENYGTCSYNDGDLSSIFTNNSLRRNLGELPNQNFRGNSISRSSYSSPNSVISSVEGPVDSPSSILQVPDLNSETQSILQFQKGVEEASKFLPSGNGLFANLGVANFSKLEPRVGSDELPVKVEKDEGESFPAGSKIRKHHHREEGGVEENRSSKQAAIFSEPTLRSSMIDIILLHSLGDGKKHFMARREALQTKNEKIVVSNGKSKASNGGKGRSKKQNGKKEVVDLRTLLVLCAQAVAADDYKGANELLKQIRQHSNPFGDGNQRLAHIFADGLEARLSGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMTAFISNVTIRKSSANSARLHIIDFGILYGFQWPTLIQRLSLAGGAPKLRITGIDSPQPGFRPAERIVETGRRLAAYAESFKVEFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGKNVLDESVVVDSPRNKFLSLIRKINPNIFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLEAIVSREEWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQPFEREIVKRAIEKVTTSYHKDFVIDEDSQWLLQGWKGRIIYALSCWKPA* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1477 737 PANTHER SCARECROW-LIKE PROTEIN 9 38 736 - -
Gso18g1477 737 MobiDBLite consensus disorder prediction 262 291 - -
Gso18g1477 737 MobiDBLite consensus disorder prediction 338 358 - -
Gso18g1477 737 MobiDBLite consensus disorder prediction 338 352 - -
Gso18g1477 737 Pfam GRAS domain family 365 735 IPR005202 -
Gso18g1477 737 MobiDBLite consensus disorder prediction 262 288 - -
Gso18g1477 737 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 736 IPR005202 -
Gso18g1477 737 MobiDBLite consensus disorder prediction 166 195 - -
Gso18g1477 737 ProSiteProfiles GRAS family profile. 356 735 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1477 Gso-Chr18 43689268 43693078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1477 66 736 GRAS Transcription Factor Family AT2G37650 52.924 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso18g1477 GRAS 8e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1477 - - gmx:100801824 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1477 18 43689268 43693078 Gso7g1134 7 15804107 15807770 GST