Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1469 ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGATCACTTCTAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAAATAGCAGGAGCTCATCAGCCTCCATACCCGTCACTTCTCGGAGTGAGGGTGAGATCTTGCAATCTTCCAACTTGAAAAGCTTCAGCTATCATGAGCTAAGAGCAGCCACAAGAAATTTCCGCCCCGATAGTGTCTTGGGAGAGGGCGGGTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAGCATTCACTTGCTGCTACCAAACCAGGAATAGGCAAGATTGTTGCTGTTAAGAAGCTTAACCAAGATGGGCTCCAGGGTCACAGAGAGTGGTTGGCTGAAATAAACTATCTTGGCCAACTACAGCATCCTAACCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAACATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCATGGAAAATCATCTATTCAGAAGAGGTTCTTACTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCACTAGGGGCTGCAAAGGGTCTTGCTTTTCTTCATAGTACAGAACATAAAGTCATATACCGTGACTTTAAAACGTCAAATATCCTACTCGATACAAACTATAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCTACTGGTGATAAAAGCCATGTCTCTACTAGGGTCATGGGAACCCGTGGATATGCGGCACCAGAGTATTTAGCGACAGGTCATCTCACTACCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCTATTGACAAGAACCAGCCAACTGGAGAGCATAACCTTGTTGAATGGGCCAAGCCTTATCTATCTAATAAACGAAGAGTCTTCCGTGTAATGGATCCCCGTCTCGAAGGTCAATATTCACAGAATCGAGCTCAAGCAGCAGCTGCGCTTGCTATGCAATGTTTTTCCGTAGAGCCTAAGTGCAGGCCGAATATGGATGAGGTGGTAAAAGCATTGGAGGAGCTTCAGGAATCAAAGAACATGCAGAGAAAAGGCGCTGATCATAAACAGCATCATGTACGCAATTCCGGCCCCGGCCGTACCAATGGTGGCGATGGTGGTTCAGATGCCCCTAGAAAGGCTTCTGCTTATCCTAGACCTTCTGCTTCTCTCCTCCGCGGTTGA 1233 0.4574 MGACWSNRIKAVSPSNTGITSRSVSRSGHDISSNSRSSSASIPVTSRSEGEILQSSNLKSFSYHELRAATRNFRPDSVLGEGGFGSVFKGWIDEHSLAATKPGIGKIVAVKKLNQDGLQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEHKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTTKSDVYSFGVVLLEMISGRRAIDKNQPTGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSQNRAQAAAALAMQCFSVEPKCRPNMDEVVKALEELQESKNMQRKGADHKQHHVRNSGPGRTNGGDGGSDAPRKASAYPRPSASLLRG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1469 410 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Gso18g1469 410 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1469 410 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1469 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gso18g1469 410 MobiDBLite consensus disorder prediction 13 48 - -
Gso18g1469 410 PANTHER OS01G0588500 PROTEIN-RELATED 22 395 - -
Gso18g1469 410 PANTHER KINASE 1B 22 395 - -
Gso18g1469 410 MobiDBLite consensus disorder prediction 362 410 - -
Gso18g1469 410 SUPERFAMILY Protein kinase-like (PK-like) 41 355 IPR011009 -
Gso18g1469 410 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
Gso18g1469 410 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Gso18g1469 410 CDD STKc_IRAK 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1469 Gso-Chr18 43387819 43391298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1469 51 355 Glycoside Hydrolase AT3G07070 51.307 4.38e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso18g1469 Pkinase 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1469 - - gmx:100819620 793.112