Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1465 ATGGCTGCTACTCAAAAGCCCATCAAATCTTGCACCCCCAAGAAACTCCCGAACGCCCCAATTTCAGTTTCTAAGGTGAGGGTCATCGTCAGAGTCAGGCCCTTCCTCGCACACGAAACCTCATCAAGAAACGGCGTTGTTTCGTGCATCTCCGTCCTGGACCAAGATTTCGAATCTCCGCAGGACGAGGTTACCGTTTATCTCAAAGACCCACTAACCAGCCGGAACGAGTGCTACCTGTTGGACTCTTTCTTTGGGCAAGAAGATAACAATGTGGGCCAGATATTCTGCGGAGAAGTGAGCCCCTTGATTCCGGGAATGTTCAGCGGATGCAATTCCACGGTGTTTGCTTATGGGGCTACCGGCAGTGGGAAGACATACACCATGCAGGGAACCGAGGAACAACCTGGCTTGATGCCACGGGCAATGTCCATGATCCTGTCTATTTGCCAGAGGACTGGCAGCACAGCACAGATCTCATACTATGAGGTCTACATGGACCGATGCTATGACCTCTTGGAGGTCAAAGCGAAGGAGATTTCAGTTTGGGATGACAAAGACGGGCAAATTCACCTCCGGGGACTATCTCAGGTCCCTATAAACACAATGTCTGAATTTCAAGATGTTTTCTCTTGTGGAGTTCAGAGACGCAAAGTTGCACATACAGGCCTCAATGATGTCTCTAGTAGGAGTCATGGAGTGCTTGTGATATCTGTGTCCACTCTTTCTGCTGATGGCACAGGAACTGTTGCATGTGGAAAGTTGAATCTCATAGACTTGGCAGGTAATGAAGATAACAGAAGGACATGTAATGAAGGGATTCGTCTCCAAGAGAGTGCCAAGATAAATCAGTCATTGTTTGCGCTGTCAAATGTGATATATGCATTGAACAACAATAAAACAAGGGTACCCTACCGAGAAAGTAAATTGACCCGTATATTGCAGGACTCTCTAGGCGGAACAAGTCGTGCACTGATGATTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTAGCTGCTCGATCAAGGCATGTCTCTAATTTTGTGCCTTCAGGTCACAAACAAGAGACCCCAAAAGTTAAAGTTGACATGGAAGCAAAATTGAGAGCTTGGCTAGAATCAAAAGGCAAAACAAAGAGTGCACAAAGACTTGGGCCATTAAATTCTCCACTTCCAAAAAAAACACCCAGTTCTATTGTTACTCCTGCTAAGAGATCCATTACCTTTAACAGTTCAGTGAAGAAGTGGGGGAAAACTGCCAACCTAGATGCTCAACATACTAATGAAAGGGCCTTTGCTGTAGCTTTTGGAAATTTACTAGATGTTGAAGGCTCTTTTCATTCATGCATGGAGAATGCACCATCTGGTGTCAAGGACAATGATAAGAAAGAGACTGAGCATGATGCCAATAAGGCTGCAAGGAAATCATACAAAAGTCTACCTGTTGAGTCATTGAGCAAGGGAGTGGACTCAATTACTATTGATGGTAAAGATGCAGCACAAAGTCCATTAAGAAAAGCCCTCTCCCCCATCAACATCAATGGTAATGAGAAACCCCTTGAATCACAAACACCTTTTCTGGCAACCTGCTCCACTAATAAAGGGGCACAAAAGAATGACACTCCACTTGGCAAATTCAGCACACGAAGTTCTACACTGAAGAACTGTCTAGTTCAAGAATACATTGATTTCTTGAATAATGCAAGCAGAGAGGAGCTACTAGAGTTAAAGGGTATAGGAGAGAAAATGGCAGAATACATAATAGACCTTAGAGAAGAAAGTCCCCTAAAATCGTTAAATGATTTGGAGAAGATAGGCCTCTCTTCCAAGCAGGCCCATAACTTGTTCACAAAAGCTGCAAAAACGCTATTTGAAGATAAAGCTGAAGATTCAATACTCGGTTGA 1923 0.442 MAATQKPIKSCTPKKLPNAPISVSKVRVIVRVRPFLAHETSSRNGVVSCISVLDQDFESPQDEVTVYLKDPLTSRNECYLLDSFFGQEDNNVGQIFCGEVSPLIPGMFSGCNSTVFAYGATGSGKTYTMQGTEEQPGLMPRAMSMILSICQRTGSTAQISYYEVYMDRCYDLLEVKAKEISVWDDKDGQIHLRGLSQVPINTMSEFQDVFSCGVQRRKVAHTGLNDVSSRSHGVLVISVSTLSADGTGTVACGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKTRVPYRESKLTRILQDSLGGTSRALMIACLNPGEYQESVHTVSLAARSRHVSNFVPSGHKQETPKVKVDMEAKLRAWLESKGKTKSAQRLGPLNSPLPKKTPSSIVTPAKRSITFNSSVKKWGKTANLDAQHTNERAFAVAFGNLLDVEGSFHSCMENAPSGVKDNDKKETEHDANKAARKSYKSLPVESLSKGVDSITIDGKDAAQSPLRKALSPININGNEKPLESQTPFLATCSTNKGAQKNDTPLGKFSTRSSTLKNCLVQEYIDFLNNASREELLELKGIGEKMAEYIIDLREESPLKSLNDLEKIGLSSKQAHNLFTKAAKTLFEDKAEDSILG* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1465 640 ProSiteProfiles Kinesin motor domain profile. 25 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 PANTHER BNACNNG40390D PROTEIN 17 638 - -
Gso18g1465 640 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 17 638 - -
Gso18g1465 640 MobiDBLite consensus disorder prediction 385 405 - -
Gso18g1465 640 MobiDBLite consensus disorder prediction 459 481 - -
Gso18g1465 640 SMART kinesin_4 23 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 Pfam Helix-hairpin-helix motif 571 611 - -
Gso18g1465 640 Gene3D Kinesin motor domain 22 391 IPR036961 -
Gso18g1465 640 MobiDBLite consensus disorder prediction 387 405 - -
Gso18g1465 640 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 PRINTS Kinesin heavy chain signature 254 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 PRINTS Kinesin heavy chain signature 303 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 378 IPR027417 -
Gso18g1465 640 Pfam Kinesin motor domain 31 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso18g1465 640 CDD KISc_KID_like 26 349 - -
Gso18g1465 640 SUPERFAMILY RuvA domain 2-like 565 613 IPR010994 -
Gso18g1465 640 MobiDBLite consensus disorder prediction 462 480 - -
Gso18g1465 640 ProSitePatterns Kinesin motor domain signature. 253 264 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso18g1465 640 Gene3D - 557 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1465 Gso-Chr18 43200740 43205255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1465 25 383 Calmodulin-binding Proteins AT5G65930 32.520 1.56e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1465 K10403 - gmx:100795452 1249.19