Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1461 ATGCCTTCATGGTCGTCTTCTTCTTCCGCTCTAACCGCTCCCAATTTGCGTCTTCGCACTCTCAGAATTTGGTCCTCCAAGGACTATGCAATCGCCGCATTCATTTTCCTCATTCTCTTCTCTCTCCTTCTCTTCTCCCACTTGGATTCCCGTTCCCATTCCCGTTACGATTCCCAGCCCCATCACTCCAAGCTCGTTCCGTTAACCCTCCTCCGCAACGCCAACCAAACGCGCGCGCTTTGCTTGGACGGGAGCGCTCCCGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCCCGCAATTGGCTGATCCACATTGAGGGAGGAGGGTGGTGCAATTCGATACCTTCTTGCTACCAGCGAAAATTCACTCATTTGGGGTCTTCCGATCATATGGAGAAGCTTATTCCTTTTTCAGGAATTTTGAGCTCTGACCCTGCTCAGAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGTTATTGTGACGGTGCATCTTTTGCGGGTCATCCAGAGAGTGAGCAGAGAGGAAGTGGGTTGTTCTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAACTGGCCTGTCTAATGCAAAGCAGGCTTTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTATACACTGTGATAGTTTCCGGCAAGTACTTCCAAAGGAAGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTGCCCAGCTTCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTGCTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATTTTGGTGCCTCAAGGATCAGATCCTGATGGTCACTGGCAACGGTGCAGACTGGACATTCGCAGTTGTAATGCTAATATGATTGATAAACTTGACAGTTACCGTGGCTCTTTGCTGAAGGCTGTGAATGAATTCCAACAACGAAAGGAGATTGGAATGTTTATAGATTCATGCTTCGTCCATTGCCAGACTGAGATGGAAGTGACATGGCATTCACCCAACTCTCCTAAAATAAATGATAAGACAATTGCGGAATCTGTTGGTGATTGGTACTTTGACCGAGAAGCGGTAAAGCGCATTGACTGCTCTTCTTTTTCGTGCAACCCCACTTGCCACAACATGGATTTCACCTGA 1299 0.4627 MPSWSSSSSALTAPNLRLRTLRIWSSKDYAIAAFIFLILFSLLLFSHLDSRSHSRYDSQPHHSKLVPLTLLRNANQTRALCLDGSAPGYHFQSGFGSGSRNWLIHIEGGGWCNSIPSCYQRKFTHLGSSDHMEKLIPFSGILSSDPAQNPDFFNWNKVKIRYCDGASFAGHPESEQRGSGLFFRGQVIWEAIMDELLSTGLSNAKQALLSGCSAGGLATLIHCDSFRQVLPKEATVKCLADAGFFLDEKDISGNSTMRSFYHDVAQLQGLAKSLHKDCIAKMEPSKCLFPSEIAKNIKTPLFLVHPAYDFWQIRNILVPQGSDPDGHWQRCRLDIRSCNANMIDKLDSYRGSLLKAVNEFQQRKEIGMFIDSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFSCNPTCHNMDFT* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1461 432 Pfam Pectinacetylesterase 62 410 IPR004963 GO:0016787
Gso18g1461 432 PANTHER PECTIN ACETYLESTERASE 4 23 427 - -
Gso18g1461 432 PANTHER NOTUM-RELATED 23 427 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1461 Gso-Chr18 43033522 43039859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1461 18 397 Carbohydrate Esterase AT3G09410 58.182 2.12e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1461 K19882 - gmx:100792819 851.277