Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1457 ATGTCAAAGATGGAAAGTAGTGACAATTTTTATAGCTTCGTGAATGAAAATGATCATGAGGAGGAAAACGATGTAGGACTGGAAGATGAGGATAAGGTGGATTGTGAGGTACAAAATGACGATTATGGAGATTATGATGATTTCTGGATTCCAGGTTTGTTAAAAGACGAATGTATAAGTTTTGAAACCATAGTTGATATTAGACAGTTTGACATGGAAAAAATGAGTGTTGAAGATGTAAGCAGGTTCGATTTTGCTGAGTTGGAGTTAGCGTATGTCTTCTACTATTGGTATGCTAAAATAACTGGTTTTTCTGTAAGGGAAACACTAGAACAAGCATTTGTTTGTTCATGTGCTGGTTATAGGAGAGAGAAAGGATCAACATCAAATACAAGGAAGCGCCGAGAAAGAAAAGAAAGTAGGTGTGGTTGTGAAGCAATGTTTCGTGTTCATGTGCATTTTTCCACGGGACGATGGTATGTGACATGCTGGAATTTTGAGCACAATCATTTATTATTGGACTTAAAATTGCCATCTTTGTTGCCCGCACATAGGAAGATGTCAACAATTGATATTATGCAAATTGAAAACTATAGAAAAGTAGGCATTGGACCTCCGCACATGTATGCAGCATTTGCCAATCATTGTGGTGGATATGACAAAGTGGGGTTTATTAGGAAAGATATTTACAATCAAGAAGTGCACATGAGAAAGCAACATACCTCTGATGCAAGTGGTGCATTGAAGTATTTACATGATTTACGCAAGAAAGATCTAACGATGTATGTTTTGTACACCGTGGATGAAGGGTCAAGACTACAACGGTTGTTCTGGTGTGATACTGAGAGCCAATTGCTTTATGGGGTATTTGGTGACATTCTCGCATTTGATGCCACCTATAAGAAAAATAAGTATTTGTGCCCTTTTGTTGTGTTCTCTAGTGTTAACCACCATAATCAGACAATAGTTTTTGCCGCTGCTATCGTGACTGATGAGACGAAAGAAACATATGTTTGGTTGTTGGAACAATTCTTGGAAGCAATGAAAGGAAAAGCTCCTTCTTCAATAATAACTGATGGCGATCTGGCTATGAGGAATGCTATAACAAGAGTGATGCCAAGTGTTTTTCACAAATTGTGTGCATGGCACTTATTGCGTAATGCATTGAGCCATGTTGGAGACAAACAAGTTTTGAAATGGTTGAAGAATCTAATGCTTGGTGATTTTGAAGTGGTCACATTTGAAGAAAAATGGAAAGAGATGATTGCTACCTTTGAATTGGAAGACAATAGTTGGATTGGTGAATTGTATGAAAAAAGGATGAAGTGGTCTCCTGCCCATTTGAGGGGTAATTTTTTTGCAGGCATACGGACAACATCTCGATGTGAAGCCTTCCATGCTCATGTTGCAAAATATGTTCATTCACGAACTAATTTAACTGATTTTGTAGAACAATTTAAAAGGTGTCTCACATATTTTCGCTATAGAGCGATTGTGGCAGATTATTTCTCAACATACGGGAATGAAGTTTTGCAAACAAATCTTCGATCTCTTGAGCGGTCTGCTGATCAATTGCTTACTGAGGAGATGTTTATACTTTTTCAGTCCTATGTCTCTAGGACTATTAAGCTGAGAGTCGTTGATTGCAAATAG 1653 0.3769 MSKMESSDNFYSFVNENDHEEENDVGLEDEDKVDCEVQNDDYGDYDDFWIPGLLKDECISFETIVDIRQFDMEKMSVEDVSRFDFAELELAYVFYYWYAKITGFSVRETLEQAFVCSCAGYRREKGSTSNTRKRRERKESRCGCEAMFRVHVHFSTGRWYVTCWNFEHNHLLLDLKLPSLLPAHRKMSTIDIMQIENYRKVGIGPPHMYAAFANHCGGYDKVGFIRKDIYNQEVHMRKQHTSDASGALKYLHDLRKKDLTMYVLYTVDEGSRLQRLFWCDTESQLLYGVFGDILAFDATYKKNKYLCPFVVFSSVNHHNQTIVFAAAIVTDETKETYVWLLEQFLEAMKGKAPSSIITDGDLAMRNAITRVMPSVFHKLCAWHLLRNALSHVGDKQVLKWLKNLMLGDFEVVTFEEKWKEMIATFELEDNSWIGELYEKRMKWSPAHLRGNFFAGIRTTSRCEAFHAHVAKYVHSRTNLTDFVEQFKRCLTYFRYRAIVADYFSTYGNEVLQTNLRSLERSADQLLTEEMFILFQSYVSRTIKLRVVDCK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1457 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 537 IPR031052 GO:0006355
Gso18g1457 550 Coils Coil 508 528 - -
Gso18g1457 550 Pfam MULE transposase domain 293 387 IPR018289 -
Gso18g1457 550 Pfam FAR1 DNA-binding domain 94 173 IPR004330 -
Gso18g1457 550 PANTHER OS02G0262500 PROTEIN 84 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1457 Gso-Chr18 42976706 42978358 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso18g1457 MULE 2.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1457 - - gmx:102662272 1102.43