Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1456 ATGTCTCCAGCAGGTTCATCAAGATGGAGCCCTACCACAGAACAGCTCATGATCTTGGAGGAACTGTACAGGAGTGGTATTAGAACTCCCAGTGCCTCTCAAATTCAGCAAATTACTACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAACGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTAAGAAGGAAACTCACCAAGCAACTGCAGCTACAGCAGCAGCAGCAACAACAACAATTCCAACTCCATCATCATTGCCAACAACTCAATCAAGATCATATCACTAACCATTTTGTTGGTAGCTTTGGTTATAGCACTGCTCGTTCTACTACCCATGATTTTTCCTTTTTTAACTCACCTAGCTTGATTTTTCAGGGAGGAGCTGCAAACACACCAGAACAAGCATTGAGTTGCAAATGGAATGTGCAAAACCCTCAAAGTAATTTGGTGGAGAATAAAGAGATGGCATTCTGCAACTATGGTTGGACACTTGTGGATGTTGATAATCAAGCATCTTCATGTTGCACTACTCGACCTCTCAAGACTCTTGATCTCTTTCCTCTCACAACTACCAGAATCAATGAAGACTGCACCGCCACACCACCCAAGTAG 633 0.4329 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQQQQQFQLHHHCQQLNQDHITNHFVGSFGYSTARSTTHDFSFFNSPSLIFQGGAANTPEQALSCKWNVQNPQSNLVENKEMAFCNYGWTLVDVDNQASSCCTTRPLKTLDLFPLTTTRINEDCTATPPK* 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1456 210 Coils Coil 65 85 - -
Gso18g1456 210 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Gso18g1456 210 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 206 - -
Gso18g1456 210 CDD homeodomain 8 67 IPR001356 GO:0003677
Gso18g1456 210 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Gso18g1456 210 Gene3D - 3 67 - -
Gso18g1456 210 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Gso18g1456 210 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 206 IPR044555 GO:0003700|GO:0099402
Gso18g1456 210 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso18g1456 Gso-Chr18 42951110 42953036 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1456 1 205 Wox Gene Family AT2G28610 42.149 2.24e-40 136
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso18g1456 Homeodomain 6.9e-18 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1456 - - gmx:102663963 383.259