Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1450 ATGGCAGTGCAACCTGAAATTGAGCATCCCAGGAAGGCCTATGGATGGGCAGCTAGGGATACATCTGGTGTTCTCTCCCCTTTTTGGTTCTCTAGAAGGAAAACAGGGGAGAAAGACGTGACATTTAAAGTGTTGTATTGTGGAGTATGCCACTCGGACCTTCACAAGTTGAAAAATGAATGGAGTGATTCCATCTATCCCCTTGTCCCTGGCCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTAGACAAGTTCAAGGTTGGAGACAAAGTAGCTGCGGGATGCTTGGTTGGGTCCTGCCACTCATGCCAAAACTGTGTCAACAATCTTGAGAATTATTGCCAACAAGTGATTCCCACATATGGTGCAAAGTATGTGGATGGCACCATCACATATGGGGGATTCTCAGACTTCATGGTAGCAGATGAGCACTTTGTTGTCAACATTCCAAGTGCCCTACCTCTTGATGCTGCAGCTCCTCTCCTTTGTGCAGGGATCACAGTGTATGGTCCTTTGAGATATTTTGGGCTTGACAAACCTGGCATGCATCTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATCTGGCTGTCAAATTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATCAGTACCTCTCCTAAAAAGAAAAATGAAGCCATACAACATCTTGGAGCTGATTTTTTTGTGGTCAGTAGAGACCAAGATCAAATGCAGGCTGCAATGTGCACCTTGGATGGTATAATTGATACTGTTTCTGCAGTCCACCCTCTCATGCCCTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAGCTGTTGGGGCACCGGAGAAACCTCTGGAATTGCTTCTCCCACCTTTAATTTTGGGGAGAAAAAGTATAGCGGGTAGTTACATTGGAGGAATCAAGGAGACACAAGAAATGATTAATTTCGCTGCTGAACACAATGTTAGACCGGAAATTGAAGTAATTCCTATGGATTATGTGAACACAGCAATGGAGCGTCTCCAGAAAGCCGACGTTAAATATCGATTTGTGATTGACATTGGATACACATTGAAGCCACACTATTAG 1086 0.4503 MAVQPEIEHPRKAYGWAARDTSGVLSPFWFSRRKTGEKDVTFKVLYCGVCHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVDKFKVGDKVAAGCLVGSCHSCQNCVNNLENYCQQVIPTYGAKYVDGTITYGGFSDFMVADEHFVVNIPSALPLDAAAPLLCAGITVYGPLRYFGLDKPGMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPKKKNEAIQHLGADFFVVSRDQDQMQAAMCTLDGIIDTVSAVHPLMPLIDLLKSHGKLVAVGAPEKPLELLLPPLILGRKSIAGSYIGGIKETQEMINFAAEHNVRPEIEVIPMDYVNTAMERLQKADVKYRFVIDIGYTLKPHY* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1450 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Gso18g1450 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Gso18g1450 361 SUPERFAMILY GroES-like 21 184 IPR011032 -
Gso18g1450 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Gso18g1450 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Gso18g1450 361 Gene3D - 167 323 - -
Gso18g1450 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gso18g1450 361 Gene3D - 16 353 - -
Gso18g1450 361 PANTHER ALDEHYDE REDUCTASE 1 360 - -
Gso18g1450 361 CDD CAD1 15 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1450 Gso-Chr18 42831307 42837172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1450 11 360 Monolignol Biosynthesis Gene Families AT4G37990 69.429 2.59e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1450 - K23232 gmx:100812491 701.049