Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1439 ATGGAAGAACATTCAATAAGTGATTGTTCAAATGATGGGACATTTGAGGATGTTCATATGGAGGATGATGGGGTTGCTTTGAGGATGATGAGTTTGGTTAGCAAGGTAAAGAACATGTGTTTTTGGAACGAGGATGGGCTAGATGATAATGAATGTTTTGAGAATAATGTTTCAGATGATAATGAGTTAAAGGATGAAGAAGATTATGACAATGAGGTTTTAAATGATGAAGGTTACCAATTTTATAAGTGGTATGCATGGGCCAACGATTTTTCTATTCGGAAAAGTCATGTCCTCATAAACAAGAAGGGGGAGACACTGCAACAAACATTTGTTTGTTCAAAGGAAGGTTATAGACAAGATAGAGGATTGAGTCCACGAAATAGGAAGCATGAATATAAGAATTTCACTCGATGTGGATGTAAGGTATATATCTGTGTTCATGTGAATGAATTGATTGATCATTGGTATGTGTTTGTCTTTAGTGGTGGTCATAAGCATAAGTTGTTGAATGAGCAAGATTGTGGTCTGCTTTCAGGTCACAGGAAAATTACTGCATCAGATGCAATGCAGATTGAAAATTATAGTAAAGTTGTCATTAGACCACCCCACATATATACGTCATTGGCCCAAACTTCAGGGGGTTATAATAAGGTGGGATATGTTAGAAAAGATATATATAACTATTTTGCAAGACAAGGGCGCAAGCAATCATCTGATGTTAATAGGGCTTTGAACTACTTTCACCATTTGTGTCCAAAAGATCCTATGATGGTTGTTGCTTATATTGTAGATGATGAAAATAGATTGCAACATCTATTTTGGTGTGATGCAAAGAGTTGA 843 0.3594 MEEHSISDCSNDGTFEDVHMEDDGVALRMMSLVSKVKNMCFWNEDGLDDNECFENNVSDDNELKDEEDYDNEVLNDEGYQFYKWYAWANDFSIRKSHVLINKKGETLQQTFVCSKEGYRQDRGLSPRNRKHEYKNFTRCGCKVYICVHVNELIDHWYVFVFSGGHKHKLLNEQDCGLLSGHRKITASDAMQIENYSKVVIRPPHIYTSLAQTSGGYNKVGYVRKDIYNYFARQGRKQSSDVNRALNYFHHLCPKDPMMVVAYIVDDENRLQHLFWCDAKS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1439 280 Pfam FAR1 DNA-binding domain 80 170 IPR004330 -
Gso18g1439 280 PANTHER OS02G0262500 PROTEIN 75 280 - -
Gso18g1439 280 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 280 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1439 Gso-Chr18 42429855 42430816 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso18g1439 FAR1 1.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1439 - - gmx:106797003 596.275