Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1436 ATGACAACTATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGGACCCTAACACTAAATAAGCTTACTGTTGACAAAAATCTTATAGAGGTTTTTGCAAAAGGAGTGGATGCGGATACTGTTGTTTTGATGGCAGCTCAAGCTTCAAGACTTGAGAATCAAGATGCAATAGACACTGCCATAGTTGGAATGTTGGCTGATCCCAAAGAGGTTAGTCATTGA 234 0.4103 MTTIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADTVVLMAAQASRLENQDAIDTAIVGMLADPKEVSH* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1436 77 Gene3D - 26 75 IPR023299 GO:0000166
Gso18g1436 77 ProSitePatterns E1-E2 ATPases phosphorylation site. 16 22 IPR018303 -
Gso18g1436 77 Gene3D - 11 25 IPR023214 -
Gso18g1436 77 PANTHER PLASMA MEMBRANE ATPASE 1 75 - -
Gso18g1436 77 PANTHER CALCIUM-TRANSPORTING ATPASE 1 75 - -
Gso18g1436 77 Gene3D - 1 10 - -
Gso18g1436 77 SUPERFAMILY HAD-like 7 49 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1436 Gso-Chr18 41899217 41899571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1436 1 74 Primary Pumps ATPases AT5G62670 95.946 2.40e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1436 K01535 - gmx:102660489 148.288