Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1424 ATGGCGTTTCTGAACCCTTTCTCTCTCCACATTCCCATGTCCTTGTTGTTCTTCTTCCTCTTCTTTTTTTGCTTCTGCAAAGCCAGTAGTACTACCACCTCCACCACAAAGTCACTGTCCCCCCCTTCTTCACCCTCCACTACTTCCTCCTCTGACGTTGAGCTTCTCTTGGGAAAGATCAAAGCTTCACTGCAAGGTAGTAACTCTGACAACCTTGTTTTGTCTTCATGGAACTCCTCCACCCCACTTTGTCAGTGGAAAGGCCTCATATGGGTCTTCTCCAATGGCACTCCTCTCTCATGCACTGACTTGTCCTCTCCTCAATGGACCAATCTCACACTCCTCAAAGACCCTTCTCTTCACTTGTTTTCCCTCCGGCTCCCTTCTGCAAACCTCTCTGGTTCCCTCCCTAGAGAGCTTGGAGGGTTCCCTATGCTCCAAAGTCTCTACCTTAACATTAACTCATTGGAGGGTACCATCCCTCTTGAGCTTGGTTATAGCTCCTCTCTCTCTGAGATTGATTTGGGTGACAATATGCTAGGTGGGGTTCTTCCACCTTCTATTTGGAACTTGTGTGAGAGGCTTGTTTCCCTTAGGCTCCACGGTAATTCTTTATCTGGGTTAGTTTCTGAGCCTGCATTGCCTAACTCTTCTTGCAAGAATCTGCAGGTGCTTGATTTGGGTGGCAACAAGTTCTCTGGGAGTTTCCCTGAGTTCATCACAAAGTTTGGTGGCCTAAAGCAGCTTGACTTGGGGAATAACATGTTTATGGGTGCAATTCCTCAAGGCCTAGCTGGGCTTAGTCTTGAAAAATTGAATCTTTCACACAATAACTTTAGTGGGGTTTTGCCTTTGTTTGGAGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTAGCCTGTGTGGACCACCTCTGGGAAGCTGTGCTAGGACCTCTACACTGAGTTCTGGTGCTGTTGCTGGCATTGTTATTAGTCTGATGACAGGAGCTGTGGTTTTGGCTTCTTTGCTGATAGGGTATATGCAGAACAAGAAGAAGAAGGGGAGTGGGGAGAGTGAGGATGAGTTGAATGATGAAGAGGAAGATGATGAAGAGAATGGTGGTAATGCTATTGGTGGAGCTGGTGAGGGGAAGCTCATGTTATTTGCTGGAGGTGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGGCAGGTTTTGGAGAAGACTTGTTATGGGACGGCTTATAAGGCTAAGCTTGCTGATGGAGGCACCATTGCTTTGAGGCTGTTGAGAGAAGGTAGCTGCAAAGACAAGGCTTCTTGCTTGTCTGTTATAAAGCAATTGGGGAAAATTCGCCACGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATTTATGACTACCTGCCTCTCAGAACCCTTCATGATCTTTTACATGAAGCTAAAGCTGGAAAACCAGTGTTGAACTGGGCTAGGCGACACAAGATTGCGCTGGGCATAGCGAGAGGTCTAGCTTATCTTCACACAGGACTTGAAGTTCCTGTCACCCATGCAAACGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCTTTACAGCCAGGCTCACCGATTTTGGTCTTGACAAGCTGATGATTCCTTCCATAGCCGACGAAATGGTAGCGCTTGCTAAGACGGACGGCTACAAGGCTCCTGAGCTTCAAAGAATGAAGAAATGCAACTCCAGGACTGATGTTTATGCATTCGGCATACTGCTGCTTGAAATCTTGATTGGGAAGAAGCCTGGGAAGAATGGAAGAAATGGCGAGTATGTGGACTTGCCTTCGATGGTGAAAGTGGCGGTTTTGGAGGAGACGACGATGGAAGTGTTTGATGTGGAGCTTTTGAAAGGGATAAGAAGCCCTATGGAAGATGGGTTGGTGCAGGCGCTGAAGCTGGCAATGGGGTGCTGTGCACCAGTGGCATCTGTTAGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACCCCATTTTGA 2100 0.4719 MAFLNPFSLHIPMSLLFFFLFFFCFCKASSTTTSTTKSLSPPSSPSTTSSSDVELLLGKIKASLQGSNSDNLVLSSWNSSTPLCQWKGLIWVFSNGTPLSCTDLSSPQWTNLTLLKDPSLHLFSLRLPSANLSGSLPRELGGFPMLQSLYLNINSLEGTIPLELGYSSSLSEIDLGDNMLGGVLPPSIWNLCERLVSLRLHGNSLSGLVSEPALPNSSCKNLQVLDLGGNKFSGSFPEFITKFGGLKQLDLGNNMFMGAIPQGLAGLSLEKLNLSHNNFSGVLPLFGGESKFGVDAFEGNSPSLCGPPLGSCARTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKKKGSGESEDELNDEEEDDEENGGNAIGGAGEGKLMLFAGGENLTLDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDKASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEAKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPVTHANVRSKNVLVDDFFTARLTDFGLDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1424 699 SUPERFAMILY L domain-like 83 285 - -
Gso18g1424 699 MobiDBLite consensus disorder prediction 680 699 - -
Gso18g1424 699 Gene3D Phosphorylase Kinase; domain 1 387 475 - -
Gso18g1424 699 ProSiteProfiles Protein kinase domain profile. 399 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1424 699 MobiDBLite consensus disorder prediction 350 374 - -
Gso18g1424 699 Pfam Leucine rich repeat N-terminal domain 54 88 IPR013210 -
Gso18g1424 699 Pfam Protein tyrosine and serine/threonine kinase 403 674 IPR001245 GO:0004672|GO:0006468
Gso18g1424 699 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 15 699 - -
Gso18g1424 699 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 15 699 - -
Gso18g1424 699 SUPERFAMILY Protein kinase-like (PK-like) 403 675 IPR011009 -
Gso18g1424 699 Gene3D Transferase(Phosphotransferase) domain 1 478 687 - -
Gso18g1424 699 Gene3D Ribonuclease Inhibitor 51 218 IPR032675 -
Gso18g1424 699 Gene3D Ribonuclease Inhibitor 219 316 IPR032675 -
Gso18g1424 699 Pfam Leucine rich repeat 221 279 IPR001611 GO:0005515
Gso18g1424 699 MobiDBLite consensus disorder prediction 678 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1424 Gso-Chr18 41505370 41508454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1424 9 699 Receptor kinase-like Gene Family AT3G24660 71.243 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso18g1424 PK_Tyr_Ser-Thr 8.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1424 - - gmx:100814814 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1424 18 41505370 41508454 Gso8g2960 8 47238855 47242104 GST