Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1414 ATGCCAGAAAATAAGACAGGAAACTTGTTAGGTACCAACACTGGTAAGGATCCTACCATGTTTCCTAAACATGCCCAAGCTCAACCAGAATTATCCAGTGGTGTCTCAAATACTGGACGTCATGTAAATAATAACAATATTGCTATACAGGCAGGAGAAGAATTTTCTACAAATGTTGGTTGTGATGGAATTGCTGCTGGAAGGGTTCCTGTTTCACCTGATATACCTCGACATTGTGAGAATGTGTTTGGGTTGAACAGGGAGAATGGCCATGTGAGATATGAAGATCTTACTAATATTCTGGGGTTGAGGAGAATGGACTCTGAGAGTTCTTCTGATATATCTGACTTTGTCGCTATAAAACAGCCAGCACAGGAGATGGAAAATGGAGCTTCTGCCAACATTTTAAGCAAAATTCAGAAGAGAGATGGTGTGTCAAGGAAGGTTTTTCAAGAACCAGTTGGTGTCCAGTCTAGTCTCGCTTCAGCTGTATCACCCCTTCGCAGATATGAAGCTTCTCAGTCCAATGGATTTTCCGGTTTGGGAATTTTAGATGATTTTCAGTCTGGGAAAATGAAGTTTCTATGCAGCTTCGGTGGAAAAATATTACCAAGACCCAGCGATGGGAAACTCAGATATGTAGGGGGAGACACACACATTATATCTATCCGAAAGGATATTTCATGGGAACAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATCAAGTACCAGCTTCCAGGGGAGGATCTTGATGCTCTAATATCTGTTTTCTCTGATGAAGATCTTCAAAATATGAAGGAGGAATACCATGGGCTTGAAAGGCATGAAGGTTCTCAAAAACTTAGAATATTTTTAGTTCCTTTGGGTGAATCTGAAGAGACATCATCGACAGAGGTAAGTGCTGTTCGGCAGAATGATCCTGATTACCAATATGTTGTTGCCGTGAATGGCATGGGAGACCCTACTAGGACAAACATTGGTGGGCAAAGTTTGACAAATGAAGCCAGTTCATTCGGGACAGAACCGAATTTGGCTCCAGTTTTTTCGAAAATTCCAAATGCTTCTTCTCTGTTGGAGATCAGGGATGCTATTAATGCTTTAAATCCAGATGGAATTTTGAATGATTCCCTGAATTTCCAAAGGCCCTTGCCAATTCCTCCCACTCCAATCCAGGTAACAGGTTCTAGCACAGGTTATATACAATTGCTCGGTAACAACTCATGCCAGGGAAGTATTGAGAGCAATGCATCATTTGCTACTGCTCAGCTACATACTGAGTACTCCAATATAAGAACTGCGGATTGCAGATACCCTCAACAAGTGGCTGCTACTTTGTCAAGCGATACCCATCCTTATCAGCATGGAGATGTTGGTTGGCCCAAAAAGCTCAATGGGCATTTGGACTACAGTCCTGGCAATGAATTAGTGACTCCCTTATGTGTTAATCCAAGTGATGGTTACAGTGATGAAATTTTTGGTGGAAGGTCCATGCAAAAGGAAAGAAGAGTCTACTCTGAAAATCCTCTTTCATGCTTGGATGATCTAATCTATCAACAGGGTGAATCTTATGGAATTACAGACTCCCCTCATGGGATGCCCCATGCCTTATCTGATCCACAGTTGAACAAGAGTGGAGCAAGGTCTGGTTACATCTCGCAAGATGGATTTGGTCAATCTTTCTCCATTAACCTTGAAAAGTGTCAATTATCTTCGATGTTACCCCCTAAAGTCTCACAGGTGAACCTTAAGGAGAATCAGCATGAGTCCATTGTCCATCATCCTCAAATGCAAAGTAAGACACCAAAAGTTGAGTCATCTGAGCCACACAAAAGGCAAGATTTGGCATCTTCTCCATACTATGATTCATTGGGAATGAATGATCCTGTTCATATGATGGATAGCATTATAACTGAAAAAAAGAACCTTATTGCTCAAACTGACTTGAGTGGACCCAGCTATGTTGCTGAGGATATTCAGGAAAATTCTGTAAAATTAGAAAGGATGAAGTTAATTGAAGAAAAGAATCCAATTTTTATTGATAACAAGGTTCATGAGGTGAAATCAGCTGTCATTGATATGGGACATGTGCCTGAATTGCATCTTTTGGAGTCCTTCCCTGCTAATAACTTCAATGCTATGATTAATATGCAAAAGAATTGGGAGCTACCTTCTGAGGGTATAGTTCCTGTTTCATCAGGCATGATGGGCCTCTCTCTAAATAATCTAGTGGGAAAGGCCCGATCTGATCTTGACATGAGCCAAAGGACTAGTGATCACAAAAAATGTGCTTTGGCTGAAGGTCTGAATGGTGAACAAGGGATTGATTTTTCATTGACCAGAAATTTTGATTTAAATGCTCCAATTTTAAATTGTGAAGTAGGCTCTTGTGACAAATTTTCTCAAGGAGATCATATGTTCAAGCAGTCCATTCACCCAGATTCTCTTAAAGCCAAACAAATTCATCCTTGTAAGAATCAGAGGGCTGCAGGTTTTCAAGAAAATCCTACTGTAAGCTCTGCAAGTTTGTATCCTTCTGCATTTCGTGATGATCTCAGTCCAAATCTAAACATGCCATTGAATGACCAGGATAATTCAAGCAATATTATGTCTTTTAAAATTGCACCATCTTATCTTGATGACTTTATTATCAGCACTGGTCAAATGGTGAGTCAGATTATCCCCGAATACTCTGCCTCTGGAATGTCAAAAGTTGAAGATAAAATTTCAGAACAATCAAGAAGGTGTAATGATGTAAATCGAGTGGAGCCGTTTGTTGTAGTAGAAGACATGAATGGTGTTGTTTGTCCATATATTTCAGAGGATGTTGGAAGTGTTGTTGTATCCCTATCTCATACAGAAGCTGAGAGCATCGTCCCTGAGTCTGAATCTGAGGATTTTAATGACAATCAAACAGACAAAAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCATTTATGGTTTACAGATAATAAGGAATGCTGATCTTGAAGACCTTACGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGGTCTTCTGAGCAAGAACGGTTGGCAAAAGATTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGGTGGAACCCTAGCAACTGTAACAGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTAAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGTAATACCCTTGTATCTGGTGGTGTGCGGGGAACCCTTCCATGGATGGCACCGGAGCTGTTGAATGGGAATAGCAGTCGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGCTATTAACAGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACTCTTAGACCTCCTGTGCCTGAACGGTGTGATTCTGAATGGAGGAAGCTTATGGAAGAGTGTTGGTCACCTGACCCTGAAAGCCGGCCATCCTTCACAGAGATAACTAGCAGGTTAAGATCTATGTCTATGGCCCTTCAAGCAAAAGGGAGTCATCAGGCATATCAGTTAAGACCTGCTGGAGCTTCCTGA 3879 0.4078 MPENKTGNLLGTNTGKDPTMFPKHAQAQPELSSGVSNTGRHVNNNNIAIQAGEEFSTNVGCDGIAAGRVPVSPDIPRHCENVFGLNRENGHVRYEDLTNILGLRRMDSESSSDISDFVAIKQPAQEMENGASANILSKIQKRDGVSRKVFQEPVGVQSSLASAVSPLRRYEASQSNGFSGLGILDDFQSGKMKFLCSFGGKILPRPSDGKLRYVGGDTHIISIRKDISWEQLMKKTLGICNQPHTIKYQLPGEDLDALISVFSDEDLQNMKEEYHGLERHEGSQKLRIFLVPLGESEETSSTEVSAVRQNDPDYQYVVAVNGMGDPTRTNIGGQSLTNEASSFGTEPNLAPVFSKIPNASSLLEIRDAINALNPDGILNDSLNFQRPLPIPPTPIQVTGSSTGYIQLLGNNSCQGSIESNASFATAQLHTEYSNIRTADCRYPQQVAATLSSDTHPYQHGDVGWPKKLNGHLDYSPGNELVTPLCVNPSDGYSDEIFGGRSMQKERRVYSENPLSCLDDLIYQQGESYGITDSPHGMPHALSDPQLNKSGARSGYISQDGFGQSFSINLEKCQLSSMLPPKVSQVNLKENQHESIVHHPQMQSKTPKVESSEPHKRQDLASSPYYDSLGMNDPVHMMDSIITEKKNLIAQTDLSGPSYVAEDIQENSVKLERMKLIEEKNPIFIDNKVHEVKSAVIDMGHVPELHLLESFPANNFNAMINMQKNWELPSEGIVPVSSGMMGLSLNNLVGKARSDLDMSQRTSDHKKCALAEGLNGEQGIDFSLTRNFDLNAPILNCEVGSCDKFSQGDHMFKQSIHPDSLKAKQIHPCKNQRAAGFQENPTVSSASLYPSAFRDDLSPNLNMPLNDQDNSSNIMSFKIAPSYLDDFIISTGQMVSQIIPEYSASGMSKVEDKISEQSRRCNDVNRVEPFVVVEDMNGVVCPYISEDVGSVVVSLSHTEAESIVPESESEDFNDNQTDKNEFLSDAMIAEMEASIYGLQIIRNADLEDLTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDSEWRKLMEECWSPDPESRPSFTEITSRLRSMSMALQAKGSHQAYQLRPAGAS* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1414 1292 Gene3D - 210 292 - -
Gso18g1414 1292 ProSitePatterns Protein kinases ATP-binding region signature. 1011 1036 IPR017441 GO:0005524
Gso18g1414 1292 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Gso18g1414 1292 ProSiteProfiles Protein kinase domain profile. 1005 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1414 1292 Pfam Protein tyrosine and serine/threonine kinase 1008 1268 IPR001245 GO:0004672|GO:0006468
Gso18g1414 1292 MobiDBLite consensus disorder prediction 594 625 - -
Gso18g1414 1292 MobiDBLite consensus disorder prediction 1 15 - -
Gso18g1414 1292 PRINTS Tyrosine kinase catalytic domain signature 1087 1100 IPR001245 GO:0004672|GO:0006468
Gso18g1414 1292 PRINTS Tyrosine kinase catalytic domain signature 1124 1142 IPR001245 GO:0004672|GO:0006468
Gso18g1414 1292 PRINTS Tyrosine kinase catalytic domain signature 1195 1217 IPR001245 GO:0004672|GO:0006468
Gso18g1414 1292 PRINTS Tyrosine kinase catalytic domain signature 1239 1261 IPR001245 GO:0004672|GO:0006468
Gso18g1414 1292 SUPERFAMILY CAD & PB1 domains 207 297 - -
Gso18g1414 1292 PANTHER SERINE-THREONINE PROTEIN KINASE 105 1284 - -
Gso18g1414 1292 Gene3D Phosphorylase Kinase; domain 1 998 1092 - -
Gso18g1414 1292 SMART serkin_6 1005 1274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1414 1292 CDD PB1_UP2 195 290 - -
Gso18g1414 1292 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 105 1284 - -
Gso18g1414 1292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1130 1142 IPR008271 GO:0004672|GO:0006468
Gso18g1414 1292 Gene3D Transferase(Phosphotransferase) domain 1 1093 1288 - -
Gso18g1414 1292 SUPERFAMILY Protein kinase-like (PK-like) 993 1267 IPR011009 -
Gso18g1414 1292 SMART PB1_new 206 293 IPR000270 GO:0005515
Gso18g1414 1292 CDD STKc_MAP3K-like 1011 1268 - -
Gso18g1414 1292 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1414 Gso-Chr18 41143074 41154256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1414 189 471 MAP Kinase Kinase Kinase AT1G16270 38.870 4.70e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso18g1414 PK_Tyr_Ser-Thr 5.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1414 - - gmx:100809991 2592.76