Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1412 ATGGAAGCTGTTGAGGAAGGATCTGACTACGCTCGCACAAACATGGAGCGAGGAGACCATGGGCTTGAAAGGCATGAAGGATCTCAAAAACTCAGAATATTTTTAGTTCCTTTCGTTGAATTGGAAGAGGCATCATCGACAGAGGTAAGTGCTGTTCGGCAGAGTGATCGTTATTACCAATATGTTGATGCCGTGAATGGCATGGATGGTATTAATGCTTTAAATCAAGATGGAATTTTGAATGATTCCCTGAATTTCCAAAGGCCCTTGCCAATTCCTCCCACTGCAATCCAGCATGGGGATGTTGGTCGGCCCAAAAAGCTCAATAGGCATTTGGACTACAATCCTGGCAATGAATTAGTGACTCCCTTATATGTTAATCCAAGTGATGGTTACACTGATGAAATTTTTGGTGGAAGGTCCATGCAAAAGGAAATAAGAGTCTTTTCTGAAAATCCTCTTTCACGCTTGGATGATCTAATCTATCAACAGGGTGAATCTTATGGAATTACAGACTCCCCTCATGGGATGCCCCATGCCTTATCTGATCCACAGTTGAATGAGAGTGGAGCAAGGTCTGGTTACATCTCGCAAAATGGATTTTGTCAATCTTTCTGCATTAACCTTGAAAAGTGTCAATTATCTTCAATGTTACCCCATAAAGTCTCACGGGTGAACCTTATGGAGAATCAGCATGAGTCCATTGTCCATCATCCTCAAATGCAAAGTAAGACACCAAAAGTTGAGTCATCTGAGCCACACAAAAGGCAAGATTTGGCATCTTCTCCATACTATGATTCATTGGGAATGAATGATCCTGTTCATATGATGGATAACATTATAACTGAAAAAAAGAACCTTAATGCTCAAACTGACTTGAGTGGACCCAGCTATGTTGCTGAGGATATTCAGGAAAATTCCATAAAATTAGAAAGGATTAAGTTAATTGAAGAAAAGAATCCAATTTTTATGGATAGCAAGGTTCATGAGGTGAAATCAACTGTCATTGATATGGGACATGTGCCTGAATTGCATCTTTTGGAGTCCTTCCCTGCTAATAACTTCAATGCTAAGATTAATATGCAAAAGAATTGGGAGCTACCTTCTGAGGGTATAGTTCCTGTTTCATCAGGCATGATGGGCCTCTCTCTAAATAATCTAGTGGGAAGGGCCCGATCTGATCCTGACATGAGCCAAAGGACTAGTGATCACAAAAAATGTGCTTTGGCTGAAGGTCTGAATCGTGAACAAGGGATTGATCTTTCATTGACCAGAAACTTTGATTTAAATGCTCCAATTTTAAATTGTGAAGTAGGTTCTTGTGACAAATTTTCTCAAGGAGATCATATGTTCGAGCTGTCCATTCACCCAGATTCTCTTAAAGCCGAACAAATTCATCCTTGTAAGAATCAGAGGGTTGCAGGTTTTCAAGAAAACCCTACTGTAAGCTCTGCAAGTTTGTATCCTGCTGCATTCGCAAATCTAAACATGCCATTGAATGACCAGGAATGTTCAAGCAATATTATGTCTTTTAAAATTGCACCATCTTATCTTGATGACTTTATTATCAGCACTGGTCAAATGGTGAGTCAGATTATCCCCGAATACTCTGCCTCTGGAATGTCAAAAGTTGAAGATAAAATTTCAGAACAATCAAGAAAGTGTAATGATGCAAATCGAGTGGAGCCGTTTGTTGTAGTAGAAGACATGAATGGTGTTGTTTGTCCATATATCCCAGAGGTTGTTGTAAGTGTTGTTGTATCCTTATCTCATACAGAAGCTGAGAGCATCGTCCCTGAGTCTGAACCTGAGGATTTTGTTGACGATCAAACAGACAAAAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCTTTATGATAATAAGAAATGCTGATCTTGAAGACCTTACGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGGTCTTCTGAGCAAGAACGGTTGGGGAAACCCATAAAGATATTGAATGCTATTGGCATGAAGAACCTTGGCCTGCTCCCAAATTCAATCTTAACTTGA 2118 0.3985 MEAVEEGSDYARTNMERGDHGLERHEGSQKLRIFLVPFVELEEASSTEVSAVRQSDRYYQYVDAVNGMDGINALNQDGILNDSLNFQRPLPIPPTAIQHGDVGRPKKLNRHLDYNPGNELVTPLYVNPSDGYTDEIFGGRSMQKEIRVFSENPLSRLDDLIYQQGESYGITDSPHGMPHALSDPQLNESGARSGYISQNGFCQSFCINLEKCQLSSMLPHKVSRVNLMENQHESIVHHPQMQSKTPKVESSEPHKRQDLASSPYYDSLGMNDPVHMMDNIITEKKNLNAQTDLSGPSYVAEDIQENSIKLERIKLIEEKNPIFMDSKVHEVKSTVIDMGHVPELHLLESFPANNFNAKINMQKNWELPSEGIVPVSSGMMGLSLNNLVGRARSDPDMSQRTSDHKKCALAEGLNREQGIDLSLTRNFDLNAPILNCEVGSCDKFSQGDHMFELSIHPDSLKAEQIHPCKNQRVAGFQENPTVSSASLYPAAFANLNMPLNDQECSSNIMSFKIAPSYLDDFIISTGQMVSQIIPEYSASGMSKVEDKISEQSRKCNDANRVEPFVVVEDMNGVVCPYIPEVVVSVVVSLSHTEAESIVPESEPEDFVDDQTDKNEFLSDAMIAEMEASFMIIRNADLEDLTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLGKPIKILNAIGMKNLGLLPNSILT* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1412 705 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 160 683 - -
Gso18g1412 705 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 14 84 - -
Gso18g1412 705 ProSitePatterns Protein kinases ATP-binding region signature. 643 668 IPR017441 GO:0005524
Gso18g1412 705 SUPERFAMILY Protein kinase-like (PK-like) 628 669 IPR011009 -
Gso18g1412 705 Coils Coil 541 561 - -
Gso18g1412 705 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g1412 705 ProSiteProfiles Protein kinase domain profile. 637 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1412 705 Gene3D Phosphorylase Kinase; domain 1 614 699 - -
Gso18g1412 705 PANTHER SERINE-THREONINE PROTEIN KINASE 14 84 - -
Gso18g1412 705 PANTHER SERINE-THREONINE PROTEIN KINASE 160 683 - -
Gso18g1412 705 MobiDBLite consensus disorder prediction 235 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1412 Gso-Chr18 41084932 41091654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1412 598 681 MAP Kinase Kinase Kinase AT1G79570 62.353 3.91e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1412 - - gsj:114397246 1255.74