Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1410 ATGGACATGGACTTGGGCAGTTTCATCTCAGGTCAAATCACACAGATCGCCCAGTGCAGCACCTCCAGATTAGGGTTCCCAGCGTTGATCACAACACTATGTGACGCTCAGGGGGTCGTTTCTGACACCATGACTTTTGAGTCACTAAGTCATATGAACCCACCACTTACGACCCCAGAGGCCTTCATCCAGCAAGTTGTGTGGCCTGGAGTACAACCCTCTATTGATGGGGGAGGGGGGGATGGTATTAATGCTTTAAATCAAGATGGAATTTTGAATGATTCCCTGAATTTCCAAAGGCCCTTGCCAATTCCTCCCACTGCAATCCAGCATGGGGATGTTGGTCGGCCCAAAAAGCTCAATAGGCATTTGGACTACAATCCTGGCAATGAATTAGTGACTCCCTTATATGTTAATCCAAGTGATGGTTACACTGATGAAATTTTTGGTGGAAGGTCCATGCAAAAGGAAATAAGAGTCTTTTCTGAAAATCCTCTTTCACGCTTGGATGATCTAATCTATCAACAGGGTGAATCTTATGGAATTACAGACTCCCCTCATGGGATGCCCCATGCCTTATCTGATCCACAGTTGAATGAGAGTGGAGCAAGGTCTGGTTACATCTCGCAAAATGGATTTTGTCAATCTTTCTGCATTAACCTTGAAAAGTGTCAATTATCTTCAATGTTACCCCATAAAGTCTCACGGGTGAACCTTATGGAGAATCAGCATGAGTCCATTGTCCATCATCCTCAAATGCAAAGTAAGACACCAAAAGTTGAGTCATCTGAGCCACACAAAAGGCAAGATTTGGCATCTTCTCCATACTATGATTCATTGGGAATGAATGATCCTGTTCATATGATGGATAACATTATAACTGAAAAAAAGAACCTTAATGCTCAAACTGACTTGAGTGGACCCAGCTATGTTGCTGAGGATATTCAGGAAAATTCCATAAAATTAGAAAGGATTAAGTTAATTGAAGAAAAGAATCCAATTTTTATGGATAGCAAGGTTCATGAGGTGAAATCAACTGTCATTGATATGGGACATGTGCCTGAATTGCATCTTTTGGAGTCCTTCCCTGCTAATAACTTCAATGCTAAGATTAATATGCAAAAGAATTGGGAGCTACCTTCTGAGGGTATAGTTCCTGTTTCATCAGGCATGATGGGCCTCTCTCTAAATAATCTAGTGGGAAGGGCCCGATCTGATCCTGACATGAGCCAAAGGACTAGTGATCACAAAAAATGTGCTTTGGCTGAAGGTCTGAATCGTGAACAAGGGATTGATCTTTCATTGACCAGAAACTTTGATTTAAATGCTCCAATTTTAAAATGTGAAGTAGGTTCTTGTGACAAATTTTCTCAAGGAGATCATATGTTCGAGCTGTCCATTCACCCAGATTCTCTTAAAGCCGAACAAATTCATCCTTGTAAGAATCAGAGGGTTGCAGGTTTTCAAGAAAACCCTACTGTAAGCTCTGCAAGTTTGTATCCTGCTGCATTCGCAAATCTAAACATGCCATTGAATGACCAGGATTGTTCAAGCAATATTATGTCTTTTAAAATTGCACCATCTTATCTTGATGACTTTATTATCAGCACTGGTCAAATGGTGAGTCAGATTATCCCCGAATACTCTGCCTCTGGAATGTCAAAAGTTGAAGATAAAATTTCAGAACAATCAAGAAAGTGTAATGATGCAAATCGAGTGGAGCCGTTTGTTGTAGTAGAAGACATGAATGGTGTTGTTTGTCCATATATCCCAGAGGTTGTTGTAAGTGTTGTTGTATCCTTATCTCATACAGAAGCTGAGAGCATCGTCCCTGAGTCTGAACCTGAGGATTTTGTTGACGATCAAACAGACAAAAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCTAGCTTTATGATAATAAGAAATGCTGATCTTGAAGACCTTACGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATTAAGAAGAGCTGCTTTGCAGGGAGGTCTTCTGAGCAAGAACGGTTGGGGAAACCCATAAAGATATTGAATGCTATTGGCATGAAGAACCTTGGCCTGCTCCCAAATTCAATCTTAACTTGA 2154 0.4076 MDMDLGSFISGQITQIAQCSTSRLGFPALITTLCDAQGVVSDTMTFESLSHMNPPLTTPEAFIQQVVWPGVQPSIDGGGGDGINALNQDGILNDSLNFQRPLPIPPTAIQHGDVGRPKKLNRHLDYNPGNELVTPLYVNPSDGYTDEIFGGRSMQKEIRVFSENPLSRLDDLIYQQGESYGITDSPHGMPHALSDPQLNESGARSGYISQNGFCQSFCINLEKCQLSSMLPHKVSRVNLMENQHESIVHHPQMQSKTPKVESSEPHKRQDLASSPYYDSLGMNDPVHMMDNIITEKKNLNAQTDLSGPSYVAEDIQENSIKLERIKLIEEKNPIFMDSKVHEVKSTVIDMGHVPELHLLESFPANNFNAKINMQKNWELPSEGIVPVSSGMMGLSLNNLVGRARSDPDMSQRTSDHKKCALAEGLNREQGIDLSLTRNFDLNAPILKCEVGSCDKFSQGDHMFELSIHPDSLKAEQIHPCKNQRVAGFQENPTVSSASLYPAAFANLNMPLNDQDCSSNIMSFKIAPSYLDDFIISTGQMVSQIIPEYSASGMSKVEDKISEQSRKCNDANRVEPFVVVEDMNGVVCPYIPEVVVSVVVSLSHTEAESIVPESEPEDFVDDQTDKNEFLSDAMIAEMEASFMIIRNADLEDLTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLGKPIKILNAIGMKNLGLLPNSILT* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1410 717 Gene3D Phosphorylase Kinase; domain 1 626 711 - -
Gso18g1410 717 ProSiteProfiles Protein kinase domain profile. 649 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1410 717 Coils Coil 553 573 - -
Gso18g1410 717 SUPERFAMILY Protein kinase-like (PK-like) 640 681 IPR011009 -
Gso18g1410 717 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 166 695 - -
Gso18g1410 717 ProSitePatterns Protein kinases ATP-binding region signature. 655 680 IPR017441 GO:0005524
Gso18g1410 717 PANTHER SERINE-THREONINE PROTEIN KINASE 166 695 - -
Gso18g1410 717 MobiDBLite consensus disorder prediction 247 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1410 Gso-Chr18 41019465 41077141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1410 610 693 MAP Kinase Kinase Kinase AT1G79570 62.353 3.83e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1410 - - gsj:114397246 1419.45