Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1401 ATGATGGCAAAGGAGAACACGGTGTGCGCATTGGTTCGGTTATCGAAAAACAAGGAGGAAGATAAGGTGATGATAGGGAGGGTGGGAGCGATTCTGCATCTACTGAAGCTTCTAGAAGGAGGGGGATTGCACGGGAAGAAGAACTCGGTGACTGTGCGGTACGCGCTATGTTCGACGACGAAGGAGAATAAGGTGAAGGCGGTGAGCACGGGGGTTATGAGGGCACTGGTGGAGCTGATGGTGGACTTGGGGTTGAGTATGGAGGACCTGGGGTTGAGTATGGTGTACTTGGTGAGCGTGGTGGTGGCGGTGGCGGAGGCGAAGGGGATTTATGATTTCCAACTACAAGCCCTTGTTGCCGAAGTTCGTGATCTTAGGGACAGAGAGCACTCTGCCACCGAGCAACACCACCTTCTAGTCCAGGTTTTCGACTCCCTTCAATTAGGTCAAGTTTCTTCGTCGCGTAGCGTAGTGCTTTTTGTATTTTCTTGTTGGTTTAGTTTGCCACGTTTGAGAGTAGAAGCTGAAGCGGAACGATGA 540 0.5148 MMAKENTVCALVRLSKNKEEDKVMIGRVGAILHLLKLLEGGGLHGKKNSVTVRYALCSTTKENKVKAVSTGVMRALVELMVDLGLSMEDLGLSMVYLVSVVVAVAEAKGIYDFQLQALVAEVRDLRDREHSATEQHHLLVQVFDSLQLGQVSSSRSVVLFVFSCWFSLPRLRVEAEAER* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1401 179 PANTHER U BOX DOMAIN-CONTAINING 2 145 - -
Gso18g1401 179 Gene3D - 1 124 IPR011989 -
Gso18g1401 179 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 145 - -
Gso18g1401 179 Coils Coil 115 135 - -
Gso18g1401 179 SUPERFAMILY ARM repeat 4 81 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1401 Gso-Chr18 40747105 40749372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1401 1 138 U-box Gene Family AT3G46510 35.211 2.34e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1401 - - gsj:114394839 309.301