Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1356 ATGGATGAGATTGAACTTGTAGAGAAAGTTGTAATTGCTCCCGAGCAACCTACACCTCGCAAGAGAATGTTCTTGTCAAACATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCACCCAAATGAGCTTTGGTGAGATTTGTGGCAAATTATACAGTGCACTTGGTAAAATGCTTGTGCAGTATGACTTTATGGCTGGCAGACTAGTGCCAAGTTTGGAGGAGACTCATCGGTTTGAAATAGACTGTAATGGTGCTGGCATTGTCGTAGTGGCCGCAAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCTGAGTTGAGGGAATTGGTTGTTTTCTTGCAGGAAGAGGGTGATCAAGAAACTGACATGAAAGAAAGGTCCCTTGCTTCCTTACAGCTGACTCAGTTTGGCTGTGGAAGTTTGGCTCTTGCTTCTCGCTACAACCACTGCACACTGGACGGTTCCGCAATAAGAGATTTTGAGGTAAATTTAGGAGCATTAACACGCGGTGGAGACCTCATCATAGTACCAAATGCGGATAGAACACTTCTGAGAGCTCGAAACCCTCCAAAGATAAGCCATCCACATTTTGAGTATTCAAAATCCACTGAAACACACAACTTGTTCACTATCCAAGGCAAAAGTGGTACCAATGCTACGCAATCAGCGCCCCAAAATCAAATTCGTGTGCTTCATTTGTCACCAGAAAAAATAGCCAGCTTCAAAAAGAAGGCCCTGAAGGAAAACACCACCTTAAAGAACATCACAACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAAGATGTTAGAGGAAAAAGTGTCCACAATGCTGTTTCCAGTGGATGTTAGGAAAAGGGTTGTTCCTGAACTCCCAAATGGCTTTGCAGGTAATGCGTTGGTGCCTGGTTTTGCAAGAGCAAGTGTGAGGGATCTCATTGAGCTAGAAGATGCTTGCCACATAAGGAAAGTGCAAGAAGGGGTTGAGAGGTTGGATGATGAGTACATAAAGTCAGGGATAGATTGGTTGGAGGTGAACAAAGGGGCACCTTGTATGGAAGATAGTTTCTCATTGGTGGCATGGTGGAGACTAGGGCTAGAGGAGCAGCTTTTTGCATGGGGGAGACTAAAGTGTGCCACCCCACTTGCAGTTAAGGCTGGTTTGGTCATGCTATTGCCAGGACCACAAGATGAAGGGGGTCTTAACATATGCCTGGATTTACCTGAGGATCAAATGCAGGAGTTTAGTAGGATAATGCTAGAAGTTTAA 1326 0.4427 MDEIELVEKVVIAPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPSTQMSFGEICGKLYSALGKMLVQYDFMAGRLVPSLEETHRFEIDCNGAGIVVVAARTDRKLSEFGVISAPNPELRELVVFLQEEGDQETDMKERSLASLQLTQFGCGSLALASRYNHCTLDGSAIRDFEVNLGALTRGGDLIIVPNADRTLLRARNPPKISHPHFEYSKSTETHNLFTIQGKSGTNATQSAPQNQIRVLHLSPEKIASFKKKALKENTTLKNITTFQVVAAKIWKARSIATKMLEEKVSTMLFPVDVRKRVVPELPNGFAGNALVPGFARASVRDLIELEDACHIRKVQEGVERLDDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLAVKAGLVMLLPGPQDEGGLNICLDLPEDQMQEFSRIMLEV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1356 441 Gene3D - 2 214 IPR023213 -
Gso18g1356 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 439 - -
Gso18g1356 441 Pfam Transferase family 4 435 - -
Gso18g1356 441 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 439 - -
Gso18g1356 441 Gene3D - 220 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1356 Gso-Chr18 38241642 38243637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1356 3 441 Monolignol Biosynthesis Gene Families AT5G48930 28.062 1.75e-57 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1356 K15400 - gmx:100801822 874.389