Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1352 ATGATTTTTCTGAAACAGATAAATTCTTCTTCCTCCATGCTTTCTTTCAAAGGGAGTCCATACTGGATGGCACCCGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTATTGATATATGGAGTTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAATCAGTATGAAGGGGTAGCTGCAATATTTAAAATTGGTAACAGCAGAGATATGCCTGAAATTCTGGATCACCTCTTAAGTGAGGCAAAGAATTTCATTCAGCTATGCTTACAAAGAGATCCATTAGCCCGCCCAACAGCCGAGAAGTTAATAGAGCATCCCTTTATTCGAGATCAGTCAGCAAGAAAAGCTACAAATGTCAGAATAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGTCGGACGCCTCCGGTATAG 432 0.412 MIFLKQINSSSSMLSFKGSPYWMAPEVVMNTNGYSLPIDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSRDMPEILDHLLSEAKNFIQLCLQRDPLARPTAEKLIEHPFIRDQSARKATNVRITRDAFPYMFDGSRTPPV* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1352 143 Pfam Protein kinase domain 5 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1352 143 SUPERFAMILY Protein kinase-like (PK-like) 9 122 IPR011009 -
Gso18g1352 143 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 142 - -
Gso18g1352 143 Gene3D Transferase(Phosphotransferase) domain 1 3 133 - -
Gso18g1352 143 PANTHER MAP KINASE KINASE KINASE 4 142 - -
Gso18g1352 143 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1352 143 SMART serkin_6 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1352 Gso-Chr18 37808034 37808824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1352 5 138 MAP Kinase Kinase Kinase AT1G53570 64.179 6.45e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso18g1352 Pkinase 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1352 K04421 - gsj:114394818 295.049