Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1308 ATGGCTGCCAATTTCTGGACATCATCTCATTACAAGCATCTTCTGGATCAGGAAGATGTGGATATGGTGAATCCACTTGACAAGGAAAAGGGTATCACACTGGAGGATTTTAAGCTTATTAAGATGCACATGGCTAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTGGCCACAGCAATTACATACATGAGGCGTGTTTACACCAGGAAGAGTATGACTGAATATGATCCACGTTTGGTAGCTCCAACATGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTTCTTGTATTTTACATTAAAAAATTATACACTGATGACAAGTATAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCGCTTAATTATTACCTGGTTGTATACCATCCATACCGTTCACTATCTCCGTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGGGGGTTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCGCATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAACTTCGCGTTGATATGAACGTGGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGTTCACTGATGAGAGAATCAATTCTGCTCTCCAGAAGTTGAGCTTGAGACCCTAG 762 0.3937 MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGITLEDFKLIKMHMANYILKLAQQVKVRQRVVATAITYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYTDDKYRYEIKDILEMEMKILEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGFVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTDERINSALQKLSLRP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1308 253 Gene3D - 19 143 - -
Gso18g1308 253 PIRSF Cyclin_C_H_G 1 253 - -
Gso18g1308 253 PANTHER CYCLIN 4 248 IPR043198 GO:0006357|GO:0016538
Gso18g1308 253 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Gso18g1308 253 CDD CYCLIN 46 135 IPR013763 -
Gso18g1308 253 SMART cyclin_7 149 229 IPR013763 -
Gso18g1308 253 SMART cyclin_7 46 136 IPR013763 -
Gso18g1308 253 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Gso18g1308 253 Gene3D - 7 240 - -
Gso18g1308 253 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 248 - -
Gso18g1308 253 SUPERFAMILY Cyclin-like 146 242 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1308 Gso-Chr18 35345661 35357329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1308 60 199 Core Cell Cycle Gene Families AT5G27620 30.667 5.11e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1308 K15161 - gmx:100784345 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1308 18 35345661 35357329 Gso8g2882 8 46461668 46470838 GST