Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1292 ATGGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGTCAGGCCGCAAACACCAAGTTATCAAGCAACAAAACTATCCGGAGGATTCGTGTTCGAGGTGGCAATGTTAAATGGAGGGCATTGAGGTTGGATACCGGCAATTACTCATGGGGTAGTGAAGCAGTTACTCGCAAGACTCGTATTCTAGATGTTGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACCCTGGTCAAGAATGCTATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAAGTGGCATCCAAGAAGGACTCTACTGAGGAGGGTGAGGCTGCTGCTGAAGAAACTAAGAAAAGTAACCATGTCCAGAGAAAACTTGAGAAACGCCAGAAAGATCGGAAACTTGACTCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCCTGTATTTCTTCTCGTCCTGGACAATGTGGCAGGGCTGATGGGTACATTCTGGAAGGTAAGGAGCTGGAGTTTTACATGAAGAAACTCCAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 654 0.4664 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIVQVDAAPFKQWYLQHYGVEIGRKKKVASKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1292 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Gso18g1292 217 Gene3D - 161 214 - -
Gso18g1292 217 Gene3D - 32 160 - -
Gso18g1292 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gso18g1292 217 MobiDBLite consensus disorder prediction 1 25 - -
Gso18g1292 217 MobiDBLite consensus disorder prediction 11 25 - -
Gso18g1292 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Gso18g1292 217 CDD Ribosomal_S8e_like 5 196 - -
Gso18g1292 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gso18g1292 217 MobiDBLite consensus disorder prediction 126 166 - -
Gso18g1292 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1292 Gso-Chr18 34604239 34606840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1292 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.466 2.22e-125 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1292 K02995 - gmx:100500112 421.394