Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1289 ATGATCAACATCCTTGGAACATCAGGGAGACTCAATGACATGAGGGATGTGATTGAGCAGATGAAAGAGGATTCATGTGAATGCAAAGATTCTGTTTTTGTGTCTACTATCAAGACATATGCGAATGTCGGGCTGGTGGATGAAGCAATTTCAGGAAGCTTCCTGAAATTTCTGTCTGGAATTCATTGTTTTGCAAGAAAGCATATTGGAGCTAAAACTGAGTATGATTTTGGAAGGGTGAGAGTTAACGGTGAAAGATCACTTGGAAACAATAGAAGGGCACGTTTCAATGCATTATATCAAGTTCCAGAATATTGTGACATCGACAAAATTAAGGGGAAGTTTGATGGCAAAACTGTCATCATTACGATTCCAACGATTTCGGGGAAAGTCCCTAAGAAAGAAACACAACCAACTGAACAAGAACCACCCAAAGAACCATCACAAGAAGCAAAATCAAATCCAGAGGAAGAAAAAGAAGAGGTTGATACAAGAGAAGAATCTAAAGCAGCCATGGAGAACAATGAGCCTCCATGGTGTCTTGAGGGAAAATATGCTGCAATGGTAGTTTGCTGGCTTCTTGGCAACGGGTGCCTTTTTGCGTGGAACATTGGAACACTAGCAATACTGGCTTACAAAGAGGACATGATCAATACAAGGATAAGAAACCTATTTGGATATACCCTTTTCTTCATAAGCACTTTGTCGATCTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGAACTTTTGTTGTCAAAGAAAATAAGGATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATCCTTCTTCCAGAGCCTGAAGACCTCTTTTCTGATGATCAATTCAAATCTGAAGGCATTGATTCAGGTGAGGTACACTTAGAAAAGAGTGAAGTTGAGAGAAAAAGGAATACTTCAACATCCACAGAATCTCCAACAGCACAGAGGATGGGGACCAAACCTGACCAAAGAGCACCAAGAAGCTGGAGCAATCTGAAGAAGTTAATCCTCTTGAAAAGGTTTGTGAATGCATTAGAGAAGGTAAGAAACATCAACCCCAAAAGACCAAGACGTTTTCCTTCTGATGCTAACTTAGAAATAGAAAAAGTTTTTCTCAAGCACCAAACAGCGGGAGAGAAGAATAATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTGTTTCTAAACTTGCACCTGCTCAAAGACAAAAAGTGACACTTCTAGTAAAAGCTTTTGAAACAATTCTGCCATTTCAAGTTGCTGAAAATAGTCCACGGTTTTCTCCAACAATGGAACCTCAAGCAAATCCAGTTCAACCCCTTGACAATTCCTCAAATCACAGCGAGGAAGAAACATCATTTTCTCATGATAGCAGTATGGAACTGACAGAAAATACTAGTGATGATCCAATGCCAGAACTGCACAATCATACTACGCTCAAAGAAAGATGTCTTGAGTCTCTTGACTTTCTTGGAACCAAGACAGTCAAGAATATGCCTGCCTTTGGAGCTACTGAAGAAGACTTGAGTGGAAAGCAAAGTTTAGCTGGCAGTTATGATAATGAGGAGAAGATATCAAGTGACAGTGATAATATTTATCTTGGAGAGATCAAAGATACTACCTCAAGTTCCTTAAATGAGCAAGTTGAAATTATAAGAAGCAGTCATGAGGAGGCTCCAACCAATGAAACAGTCAATGATGTTCCAGAAGATTTGCTATCTAGTGTGAATACAGAAAATCTAGATATCAAATCTAAGTCACCTGGAAGAGATGTTGAAACCAAGAATCTGAATGGTGATAATGGTGAAAAAATTTCCATGTCCAAAAGTTTAGTCCTAGAAGGTTTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCTGTAAACGAACCAACTGCCAACGACAGAAAAGAAGGAATTGAAAATGTTAAACAGGAAACTGAGACTCTTGAAGAGTTCCCTACAAAGGAACAATATGAAACTCATATTAGTGCTGTTGTAGAACCTGAGACCCCTGTAGAGAAACAGAATAACACAGGATTGTGGTACTTGGTGTATAAGCACATGGTATCAAATATGGATGAAAACAATTCCGAGTCACTAATTGATGGGGCAGATGAAAAAGAGTCAGGGTTTGATGGGAGCAAAACAAGAGGAGCTTCCTTCTCTCATGAAAGTACACCCGTGACTGATCAAGAGATGAAATTTAAGGACCATGTCGTAGCTGATCCAGAAGTTGCACGCCAACAGAATGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTATCAGACAAGGAATCACTCACTGACAGCACAATTTCAGACAACTCCAAACAATCCAACAGAACTGAAAGAGTATACAGTGAAGGCCCGAACCAAAAAGAAGAAAAGATGGAATCCGGGAACGGAATGATCCAAAAACAAGAAGAATCAGCACCAAAGGAGCAAAACAAAACAAACCAGAAAATGTCTACAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATCTACCTCTAGAGCCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAACGAAAAGGTACGGAAGAATGGATGCTTGATTATGCACTTCGAAATTTGACACAGTGA 2745 0.3945 MINILGTSGRLNDMRDVIEQMKEDSCECKDSVFVSTIKTYANVGLVDEAISGSFLKFLSGIHCFARKHIGAKTEYDFGRVRVNGERSLGNNRRARFNALYQVPEYCDIDKIKGKFDGKTVIITIPTISGKVPKKETQPTEQEPPKEPSQEAKSNPEEEKEEVDTREESKAAMENNEPPWCLEGKYAAMVVCWLLGNGCLFAWNIGTLAILAYKEDMINTRIRNLFGYTLFFISTLSILILDLATSGKGGLGTFVVKENKDAIELVQKAFDEILLPEPEDLFSDDQFKSEGIDSGEVHLEKSEVERKRNTSTSTESPTAQRMGTKPDQRAPRSWSNLKKLILLKRFVNALEKVRNINPKRPRRFPSDANLEIEKVFLKHQTAGEKNNAEEWMLDYALQKVVSKLAPAQRQKVTLLVKAFETILPFQVAENSPRFSPTMEPQANPVQPLDNSSNHSEEETSFSHDSSMELTENTSDDPMPELHNHTTLKERCLESLDFLGTKTVKNMPAFGATEEDLSGKQSLAGSYDNEEKISSDSDNIYLGEIKDTTSSSLNEQVEIIRSSHEEAPTNETVNDVPEDLLSSVNTENLDIKSKSPGRDVETKNLNGDNGEKISMSKSLVLEGLVRSLRSNLIGSGAPVNEPTANDRKEGIENVKQETETLEEFPTKEQYETHISAVVEPETPVEKQNNTGLWYLVYKHMVSNMDENNSESLIDGADEKESGFDGSKTRGASFSHESTPVTDQEMKFKDHVVADPEVARQQNEAIKMVEEAIDSILPDDQDDLSDKESLTDSTISDNSKQSNRTERVYSEGPNQKEEKMESGNGMIQKQEESAPKEQNKTNQKMSTSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRNLTQ* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1289 914 SMART CaM_binding_2 309 423 IPR012417 GO:0005516
Gso18g1289 914 SMART CaM_binding_2 822 914 IPR012417 GO:0005516
Gso18g1289 914 MobiDBLite consensus disorder prediction 297 330 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 588 607 - -
Gso18g1289 914 PANTHER CALMODULIN BINDING PROTEIN PICBP 257 911 - -
Gso18g1289 914 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 257 911 IPR044681 GO:0005516
Gso18g1289 914 MobiDBLite consensus disorder prediction 431 478 - -
Gso18g1289 914 Pfam Plant calmodulin-binding domain 320 423 IPR012417 GO:0005516
Gso18g1289 914 Pfam Plant calmodulin-binding domain 831 911 IPR012417 GO:0005516
Gso18g1289 914 MobiDBLite consensus disorder prediction 431 454 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 590 604 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 774 844 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 706 739 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 788 806 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 807 822 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 135 172 - -
Gso18g1289 914 MobiDBLite consensus disorder prediction 131 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1289 Gso-Chr18 34415210 34425689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1289 846 913 Calmodulin-binding Proteins AT5G04020 63.235 8.37e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1289 - - gsj:114397174 1761.5