Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1287 ATGGCTAGGATTGGCAAGGGTAGTGTTGAATTTGAGGATTTGTTACCAGTGTTCACCGGTAAACTGGGTGGTGAGGGTTTGATAAAGGAGCTTTGTAAGGGTTTTCGGGTTGATCCTTCAACTCACGTGGCAGTTGGGGTTGATCCTTCAACTCACCTTTATCTAATTTGTTGTGTTGAATGCATATCACATATGGATAGAACATCTATACTTGGAGACACTATTGATTACATGAAAGAACTTCTGGAGAAGATCAACAATCTGCGGCAAGAAGTAGAAGTAGATTCAAACATGGCAGGCATTTTCAAAGATGTAAAACCAAATGAAATCCTAGTGAGAAATTCACCCAAGTTTGAGGTGGAGAGGAGTGTGGACACCCGAGTGGAAATTTGCTGTGTAGGGAAGCCAGGCTTGATACTATCTACTGTAAACACTCTGAAAGCATTAGGCCTAGAGATTCAACAATGTGTTATTAGCTGTTTCAATGATTTCACAATGCAGGCTTCATGCTCAGAGGAATCGGAGCAAAGGACGATGCTGAGTTTTGAAGACATAAAGCAAGCGTTGTTTAGAAGTGCAGGATATGGAGGAAGATGTTTATGA 603 0.4129 MARIGKGSVEFEDLLPVFTGKLGGEGLIKELCKGFRVDPSTHVAVGVDPSTHLYLICCVECISHMDRTSILGDTIDYMKELLEKINNLRQEVEVDSNMAGIFKDVKPNEILVRNSPKFEVERSVDTRVEICCVGKPGLILSTVNTLKALGLEIQQCVISCFNDFTMQASCSEESEQRTMLSFEDIKQALFRSAGYGGRCL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1287 200 PANTHER DNA BINDING PROTEIN 59 200 - -
Gso18g1287 200 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 59 200 - -
Gso18g1287 200 Coils Coil 71 98 - -
Gso18g1287 200 CDD ACT_UUR-ACR-like 126 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1287 Gso-Chr18 34327621 34332749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1287 55 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 59.333 2.14e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1287 - - gmx:100787171 392.119