Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1262 ATGAAGTTCAACATCGCGAGTCCCACCACTGGATGCCAGAAGAAGCTCGAGATCGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCAGCGGAGATGCACTTGGTGAGGAATTTAAGGGCTATGTCTTCAAAATTACTGGAGGTTGTGACAAACAAGGATTCCCGATGAAACAGGGAGTGCTTACTCCTGGTCGTGTTCGACTTTTGCTTCACAGGGGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAACGTAGGAGAAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGATTTACCAGGATTGACTGATGCTGAGAAGCCAAGGATGAGAGGCCCAAAGAGAGCATCCAAAATCCGTAAACTGTTCAACCTGTCCAAGGAGGATGATGTTAGGAAGTATGTCAACACCTACCGTCGTACATTTACGACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCTAAGATACAAAGACTGGTCACCCCTCTTACGCTCCAACGAAAGCGGGCAAGAATTGCTGATAAAAAGAAGAGAATTGCCAAGGCCAAATCGGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCCAGGTTGAAGGAGCAGAGAGACCGCCGCAGTGAGAGTTTGGCTAAGAGGAGATCCAAGCTTTCCAGTGCTGCCAAGGCAGCTGTGTAA 744 0.4839 MKFNIASPTTGCQKKLEIDDDQKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDAEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLSSAAKAAV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1262 247 MobiDBLite consensus disorder prediction 218 247 - -
Gso18g1262 247 MobiDBLite consensus disorder prediction 218 237 - -
Gso18g1262 247 Gene3D - 133 234 - -
Gso18g1262 247 PANTHER 40S RIBOSOMAL PROTEIN S6 1 246 - -
Gso18g1262 247 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso18g1262 247 Coils Coil 189 216 - -
Gso18g1262 247 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso18g1262 247 PIRSF RPS6e 1 247 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gso18g1262 247 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Gso18g1262 247 PANTHER 40S RIBOSOMAL PROTEIN S6 1 246 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1262 Gso-Chr18 30798610 30801342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1262 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.554 3.74e-120 339