Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1198 ATGGATTTTGATGTCTTCATGAGAGTTGTAGAGAGTTATACCCTTGACACTCAGGCACTGACGTCGTACGTGACGAGGATCGAGTGGATCGAAGCCGACGCGCGCAACACCGACGTGAAGATTGACGTCCGGTGGTACTACCGGCCGGAGGAGTCAATCGGCGGCCACCGCCAGTTTCACGGCTCCAAGGAGGTTTTCCTCTCCTATCACTTCGATGTTCAGAGCGCCGACACAGTCAAAGCCAGGTGTACGGTCCACAGCTTCAAGAGCTACACGAAGCTCAATGCTATCGGAAACGACGATTTCTTCTATCGTTTTGAGTACAATTCCTTCACCGGCGCCTTCAATCCTGATAGAGTTGCTATGTGA 369 0.5203 MDFDVFMRVVESYTLDTQALTSYVTRIEWIEADARNTDVKIDVRWYYRPEESIGGHRQFHGSKEVFLSYHFDVQSADTVKARCTVHSFKSYTKLNAIGNDDFFYRFEYNSFTGAFNPDRVAM* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1198 122 ProSiteProfiles BAH domain profile. 5 119 IPR001025 GO:0003682
Gso18g1198 122 Gene3D - 11 120 IPR043151 -
Gso18g1198 122 SMART BAH_4 5 119 IPR001025 GO:0003682
Gso18g1198 122 Pfam BAH domain 19 118 IPR001025 GO:0003682
Gso18g1198 122 PANTHER OS08G0421900 PROTEIN 19 122 - -
Gso18g1198 122 PANTHER CHROMATIN REMODELING PROTEIN SHL 19 122 IPR045205 GO:0006325|GO:0035064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1198 Gso-Chr18 24654509 24656523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1198 14 121 Core DNA Replication Machinery Family AT4G14700 29.091 1.59e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1198 - - gmx:100803776 202.216