Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1196 ATGAAACAAGACACAGACAACAACGGAACCCTCGGCGGGTCCGAAGATTCCCTCCTCCGTTCATGTCTCTCTCTTCTCACGCGCCGCAGCTTCACCGCTTGCCGCGAGTCCGCAAACCAAATCTCAAGATCCGACCCGACCGTCTCCCTCCATCTGGACCAAATCCTCGCGGTGGCGGACGTCCTCACCGCGGCGGAGAGCCGCCGAGGACCCTCCCACCCGCACGACTGGTACTCCGTCCTCCGCCTCCACCCCGGCGGCGCCGACAACCGCGACCTAGCACGACAGCACTTCAAGACCCTCGTGCGGCTCCTCGACCCGAACAAGAACAAGCTCCCCTTCGCCGACGAGGCCCTCATGCGCGTGCGCGAGGCCTGGTGCGTTATCTCCGACCCAACGCGCAAGGCCCGCTTCGACAAAGAGATCGAAGAGTCAGCCAGAACGGCGTCGTTTTGGACAATGTGCCCTTACTGCTGGTACCTGCACGAGTACGAGCGCAAGTACGAGGACTGCGTGTTGAGGTGTTCGAATTGCCAGAGGACGTTCCACGGCGCGGCGGTGCCGCCGCCACCGCTGGAGGCGGTGGTGGCGGGAAAGGAGGAGTATTACTGCTACCACATGAGCTTGCCGGTGAGGTATCCGGTTGGCGAACGGTGTCGTTTCGGGGGTGAGGGGAATGGGGCGAGGAAGAGGATGAGGGTTAAGACGGTGGCTAATAGAATGAAAATGAAAAGGTTTGTTGATGCTAATAATGGTGAATCTGATAATGATGGGGTGAGGTAG 783 0.6028 MKQDTDNNGTLGGSEDSLLRSCLSLLTRRSFTACRESANQISRSDPTVSLHLDQILAVADVLTAAESRRGPSHPHDWYSVLRLHPGGADNRDLARQHFKTLVRLLDPNKNKLPFADEALMRVREAWCVISDPTRKARFDKEIEESARTASFWTMCPYCWYLHEYERKYEDCVLRCSNCQRTFHGAAVPPPPLEAVVAGKEEYYCYHMSLPVRYPVGERCRFGGEGNGARKRMRVKTVANRMKMKRFVDANNGESDNDGVR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1196 260 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 260 - -
Gso18g1196 260 ProSiteProfiles dnaJ domain profile. 76 142 IPR001623 -
Gso18g1196 260 SUPERFAMILY Chaperone J-domain 71 142 IPR036869 -
Gso18g1196 260 Pfam DnaJ domain 76 139 IPR001623 -
Gso18g1196 260 CDD DnaJ 76 131 IPR001623 -
Gso18g1196 260 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 260 - -
Gso18g1196 260 SUPERFAMILY FYVE/PHD zinc finger 149 205 IPR011011 -
Gso18g1196 260 Gene3D DnaJ domain 71 151 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1196 Gso-Chr18 24633651 24634929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1196 6 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.100 1.62e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1196 - - gmx:102659715 531.561