Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1189 ATGAATGAATCAATCGATTCTGGCGGCTTCACAAATATTTCTCTTCAATACCCCTTTAAGTCTTTAACCTACGGCACATGCCAAGTTTCCTACATAAACGTTGTCCCCTTCCCCACCCTCTTCTTTCATCATCCACTCCACGTTTCTCTCAATCCTCTAAGCGTCTACATTATAGATTTTTTCATTTTTGTGTGCATAAAGTTTTCTTCTTTTAATCCATCTGTTGAAGAACTAGTTTTACAAGATGAATCTCTTTCCTGGGACCACAAACATCTTAACTTTAACAATCAGTGTCTGATTAAGGACAATCATGGATCGGAACATTTTTGGGATTTTTCTGTACAGAGCGATGAAACTGTTATGGGTTTGGTTGGGAGGGAGAGCGAGCATTTGCCCCACGTTGGTTACCTCAAGAGGCTGCTTAGTGGGGACTTGGACTTGAGTGTTAGGAATGAGGCTCTTGATTGGATTTGGAAGGCTCATGCTTACTATGGTTTTGGACCCTGTAGTTTATGTCTATCTGTGAACTACTTGGATCGGTTCCTATCAGTATATGAATTACCAAGAGGCAAAAGTTGGAGTATACAACTGTTAGCAGTAGCATGTTTGTCAATTGCTGCCAAAATGGATGAGATTAAAGTGCCTCCTTTTGTAGATTTACAGGTTGGAGAACCTAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTACTGGTGTTAAGCACATTGAGATGGCAAATGCAGGCTTCAACTCCATTTTCCTTCCTAGATTACTTCCTCAGGAAGATCAACTGTGACCAAGTTATAGTAAAGTCATCCATTATGAGATCAGTAGGACCCATCCTTAACATAATTAAATGTATCAATTTCTTGGAATTCAGGCCCTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTATCAAGGGAAATACAAGCAGAAGAGATTGACAAAGCCTTACAAATGCAAGCAGAAGAAACTGCTGCAGCATGTTTTTTCATTGTTGGGAAGGAAAGAATTTTGAAGGGTCTTGAATTGATCAAAGATTTGTCATTGATGCAAGATTCTGCAAACTTGGGCAATAACTTAGCATCATTTGTACCCCAAAGCCCTATTGGGGTGCTTGATGCTGCATGCTTGAGCTCTATAAGTGATGAATTAACAGTTGGATCATATAGAGATTCTTCCCTTGATACTCCAAATTCTAAGAGGAGGAAATCTGACTAA 1230 0.3943 MNESIDSGGFTNISLQYPFKSLTYGTCQVSYINVVPFPTLFFHHPLHVSLNPLSVYIIDFFIFVCIKFSSFNPSVEELVLQDESLSWDHKHLNFNNQCLIKDNHGSEHFWDFSVQSDETVMGLVGRESEHLPHVGYLKRLLSGDLDLSVRNEALDWIWKAHAYYGFGPCSLCLSVNYLDRFLSVYELPRGKSWSIQLLAVACLSIAAKMDEIKVPPFVDLQVGEPKFVFEAKTIQRMELLVLSTLRWQMQASTPFSFLDYFLRKINCDQVIVKSSIMRSVGPILNIIKCINFLEFRPSEIAAAVAISVSREIQAEEIDKALQMQAEETAAACFFIVGKERILKGLELIKDLSLMQDSANLGNNLASFVPQSPIGVLDAACLSSISDELTVGSYRDSSLDTPNSKRRKSD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1189 409 Gene3D - 124 318 - -
Gso18g1189 409 SUPERFAMILY Cyclin-like 108 249 IPR036915 -
Gso18g1189 409 Pfam Cyclin, N-terminal domain 127 249 IPR006671 -
Gso18g1189 409 PANTHER CYCLINS 112 407 IPR039361 -
Gso18g1189 409 Pfam Cyclin, C-terminal domain 253 323 IPR004367 -
Gso18g1189 409 CDD CYCLIN 150 242 IPR013763 -
Gso18g1189 409 SMART cyclin_7 155 243 IPR013763 -
Gso18g1189 409 Gene3D - 133 250 - -
Gso18g1189 409 ProSitePatterns Cyclins signature. 150 181 IPR006671 -
Gso18g1189 409 PANTHER CYCLIN-D4-1-LIKE 112 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1189 Gso-Chr18 24241617 24244363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1189 117 392 Core Cell Cycle Gene Families AT2G22490 53.191 1.09e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1189 K18810 - gmx:100800570 637.876